Gene Tpau_3556 details

Gene Information

• Locus tag: Tpau_3556
• ID: 9157735
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3664342
• End bp: 3665124
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 70%
• Product: ABC transporter related protein
• Protein accession: YP_003648474
• Protein GI: 296141231

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.301945
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGCCA CCGTGTTGCA GGCCCGTGGC CTGGTGAAGA ACTACGGACA GGTGCAGGCC 
ATCGCGGGCG CCGACTTCGA GCTCCGCGCG GGCGAGGTGC TGGCGGTGAT CGGCGACAAC 
GGCGCCGGAA AGTCCAGCCT GATCAAGGCG CTCTCGGGCG CGCTCATCCC GAGCGAGGGC 
GAGATCCTGC TCGACGGTGC GCCGGTGCAC TTCCGCAGTA CCCTGGACGC CCGCAACGCG 
GGCATCGAGA CCGTGTACCA GGATCTCGCC GTGATTCCCG CGCTCGATAT CGCCGCGAAC 
GTGTACCTGG GCAGGGAGAT CCGTAAACCA GGAGTGCTCG GCACCGTCTT GCGGCAGCTG 
GACCGCAAGG CCATGCGCGA GGCCGCGGCG GCGCACCTCG CGGACCTCAA GATCGGCATC 
ACCTCGCCCA CGCAAGCTGT CGAGACGCTC TCCGGCGGCC AGCGGCAGGG CGTCGCGGTG 
GTGCGCGCCG CCGCCTTCGG GAAGAAGGTG ATCATCATGG ACGAGCCGAC CGCGGCGCTG 
GGCGTACGCG AATCCGGGCA GGTGATCGAC CTGATCCGGG AGATCCGCGA CCGCGGCACC 
CCGGTGATCC TGATCAGTCA CGATATGCCG CACGTGTTCG AGGTCGCCGA CCGGATCCAC 
GTGCACCGGC TGGGGCGCCG CGCCGCCGTC GTGGATCCGA AGCAGCGCAG CATGTCCGAG 
GTGGTCGCGC TCATGACGGG CGCCCTGGAG CCGACCGATG TGGAGGCGGC GGGTGGGCCG 
TGA 

 

Protein sequence

MTATVLQARG LVKNYGQVQA IAGADFELRA GEVLAVIGDN GAGKSSLIKA LSGALIPSEG 
EILLDGAPVH FRSTLDARNA GIETVYQDLA VIPALDIAAN VYLGREIRKP GVLGTVLRQL 
DRKAMREAAA AHLADLKIGI TSPTQAVETL SGGQRQGVAV VRAAAFGKKV IIMDEPTAAL 
GVRESGQVID LIREIRDRGT PVILISHDMP HVFEVADRIH VHRLGRRAAV VDPKQRSMSE 
VVALMTGALE PTDVEAAGGP