Gene Tpau_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3542 
Symbol 
ID9157721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3653674 
End bp3654720 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content65% 
IMG OID 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_003648460 
Protein GI296141217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAAC AGGGACAGAT GGCAACGGAA GATTCGGCGA CGCGCGACGC GGAACCCGAG 
ACGACATCCC ACGCGGACAC GGACACTGTT GTCGTGGGCG AGAAAGTGGA CTTCACGGAA
TCGGCCGACT CCGGGCGGAT GGAGAAGCTG TTCCGATGGG CGGCCTACGC CTCCGGTGCC
CTTCTGGTCG CCGTCATCGC GCTGATCTTC CTGCAACTCG TCGTGCAGGC GATTCCCGCG
CTGACCAAGA ACAACGTCAA CTTCCTCACC AGCTCGGAAT GGCAGACCAA CCCGAGCAAC
ATGCGGTTCG GCATCCTCGA ACTGTTCAAG ATCACCGTGC TCTCGTCGGT GATGGCATTG
ATCCTCGCGG TCCCGGTGGC CGTGGGTATC GCCACCTTCC TGGTGCAATA CGTGCCGGCG
CGCCTGTCGC GGCCGCTGAG TGCCGTGATC GACCTGCTGG CCGCGGTACC GTCGATCATC
TACGGCCTGT GGGGCATCTT CGTGCTCGCG CCCTTCCTGG TGCCGCTGCA GCGCTGGCTC
AACGAGAACC TCGGCTGGTT CTTCCTGTTC AAGACCGGCA ACGTGGAACT GTCGCTCGGG
TCGACGGTGT TCACCGCCGG CATCGTGCTG GCGATCATGA TCCTGCCGAT CATCACCTCG
ATCACCCGTG AGGCGCTGCG CCAGACCCCG GTCGCGCACC AGGAAGCCGC GCTTGCCCTG
GGCGCCACCA AGTGGGAGGT CATCCGGCTC ACCGTGTTCC CGTACGGGCG CTCGGGCATC
GTCGCCGGCT CCATGCTGGC CCTCGGTCGT GCCCTCGGCG AGACCATCGC GGTGCTGATC
ATCCTGTTCG CCGCCACCAA GAACTCCATC TGGTCGCTGT TCGACAGCGG CTACACCTTC
GCATCGAAGA TCGCTTCCGC CGCCGCTGAG TTCGACAACG TCGATCAGCG CGGCGCCTAC
ATCGCCGCCG GCCTCGTGCT GTTCGTGCTC ACCTTCGTGG TGAACGCGGT CGCCCGCTGG
ATCGGCGGGG GACGGGTGAA CGGATGA
 
Protein sequence
MAEQGQMATE DSATRDAEPE TTSHADTDTV VVGEKVDFTE SADSGRMEKL FRWAAYASGA 
LLVAVIALIF LQLVVQAIPA LTKNNVNFLT SSEWQTNPSN MRFGILELFK ITVLSSVMAL
ILAVPVAVGI ATFLVQYVPA RLSRPLSAVI DLLAAVPSII YGLWGIFVLA PFLVPLQRWL
NENLGWFFLF KTGNVELSLG STVFTAGIVL AIMILPIITS ITREALRQTP VAHQEAALAL
GATKWEVIRL TVFPYGRSGI VAGSMLALGR ALGETIAVLI ILFAATKNSI WSLFDSGYTF
ASKIASAAAE FDNVDQRGAY IAAGLVLFVL TFVVNAVARW IGGGRVNG