Gene Tpau_3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3513 
Symbol 
ID9157688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3624399 
End bp3625883 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content68% 
IMG OID 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003648431 
Protein GI296141188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATCT CCGTAGCCAT CATCGGTGCC GGCTTCGCCG GGATCGGCGC CGCGATCCGC 
CTCCAGGACA AGGGCGTCGA CGACTTCGTC CTGTTCGAAC GCGACACCCG CGTGGGCGGC
ACCTGGCGCG ACAACACCTA CCCCGGTGCC GCCTGCGACA TCCCGTCGCG CCTGTACTCG
TACAGCTTCG CGCCGAATCC GGAGTGGTCG CACACCTACT CCGGCAGCGG CGAGATCCTC
TCCTACATCG ACACCATGGT CGAATCGGCG GGCCTGCGGT CACGGATCCG ATTCGAGCAC
ACGGTGACCG GCCTGGTGTA CGACGCGGAC GCGGGGGAGT GGACGATCTC CTTCGCCGAC
CGGGACCCGG TGCGCGCCCG CACCGTGATC GTCGCATCCG GCCCGCTCGC CAACGCCTCG
TTCCCCGATA TCCGCGGTAT CGAGGACTAC CAGGGTCACA TGATCCACAG CGCCCGCTGG
GACCACGACT ACGACTTCGC CGGCAAGAAG GTCGCCGTCG TCGGCACCGG CGCGAGCGCC
GTGCAGATCG TGCCCGAGGT GGTGAAAGAG GCGGCCTCGG TCAAGGTCTT CCAGCGCACG
CCCGGTTGGG TCCTGCCCCG GATCAACACC GAGACCGGCG AATTCACCAA GCGGATCTAC
CGCAGCGTCC CCGGTGCCCA GCAGCTCGCC CGCGCCCTGT GGTTCTGGGG CCACGAATCG
GTGGCGCTCG GCGTGGTCTG GAACACCCCG CTCACCCGCG TCGTCGAGGC CGTCAGCAAG
CTGCACCTGC GGGCCCAGGT CAAGGACCCG TGGCTGCGGC GCCAGTTGAC CCCCGACTTC
GCCGCCGGAT GCAAACGCCT GCTGATGACC AGCGACTACT ACCCGGCCCT GCAGCGCGCC
AACTGCAAGC TGGTGACCTG GCCGATCGCC CGGATCGCGC CGCAGGGGAT CCGCACCGTC
GAAGGGGTGG AGCACCGTTT CGACTGCATC GTCTTCGCCA CCGGCTTCGA CGTCTCCAAG
GCCGGCACGC CGATCCCCAT CACCGGCCTG GACGGCCGGG TGCTCGCCGA CGAGTGGAGC
GGCGGCGCCT ACGCCCATCG CAGCGTCGCC GTCTCCGGAT ATCCCAACCT GTACTTCACC
TTCGGCCCGA ACTCCGGGCC CGGGCACAGC TCGGCCCTGG TGTACATGGA GGCGCAGATC
GACTACATCA CCGATGCCGT GTCCCAGTTG CTCACCGAGG ACTGGAAGGC GCTCGACGTG
CGCGCCGAGG TGCAGGACGC GTACAACCGC GACATCCAGC GCCGGCTCAC CGCCACCACG
TGGAACTCGG GCTGTCAGAG CTGGTACCTC ACCGACGACG GCTTCAACGC CACCATGTTC
CCCGGATTCG CCAGCCAGTA CGTGCACCAA TTGCGCCGCG TGGATCTGCG CGATTTCCGC
ATCCTGGTCC GCGAGGACGC CGAAGCGCCG GTGCCGGCCG GATAA
 
Protein sequence
MSISVAIIGA GFAGIGAAIR LQDKGVDDFV LFERDTRVGG TWRDNTYPGA ACDIPSRLYS 
YSFAPNPEWS HTYSGSGEIL SYIDTMVESA GLRSRIRFEH TVTGLVYDAD AGEWTISFAD
RDPVRARTVI VASGPLANAS FPDIRGIEDY QGHMIHSARW DHDYDFAGKK VAVVGTGASA
VQIVPEVVKE AASVKVFQRT PGWVLPRINT ETGEFTKRIY RSVPGAQQLA RALWFWGHES
VALGVVWNTP LTRVVEAVSK LHLRAQVKDP WLRRQLTPDF AAGCKRLLMT SDYYPALQRA
NCKLVTWPIA RIAPQGIRTV EGVEHRFDCI VFATGFDVSK AGTPIPITGL DGRVLADEWS
GGAYAHRSVA VSGYPNLYFT FGPNSGPGHS SALVYMEAQI DYITDAVSQL LTEDWKALDV
RAEVQDAYNR DIQRRLTATT WNSGCQSWYL TDDGFNATMF PGFASQYVHQ LRRVDLRDFR
ILVREDAEAP VPAG