| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3505 |
|---|
| Symbol | |
|---|
| ID | 9157680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3616612 |
|---|
| End bp | 3618195 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003648423 |
|---|
| Protein GI | 296141180 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.767947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGTG CTACTCGGGG GCGACGATCC GCATCCACCC GCCCGAACGC GCGACGGGGC
GCGCTCCGGT TCGCGCTGAT CGCGATCCTG CTCCTGCCGC TGCTGGCCGT CGGGCCGCAG
GCGCAGGCCG CGCCGCAGGG CTACAACCAG TGGGTCGATG TGTGGGACAA GTCCGTCCCC
AAGGCCGACT GCCGCCCCGG CGACCGCGCC GAGAAGGGCA TCCAGGGCGA CGTGCCGCTG
GAGGACCGCA AGAGCGGTCG CAGCACCCAG GGGTACAACT GCAACATCGA CCTGGTCGGC
CGGTATCAGG GCGACGGTGC CGGCATCGTC AGCCCGAGTT ACAAGAACTG CTCCTACATC
TCCACCACCT TCCCCACGAA CTTCGCCGGG AGCAGCGGGC CGGGGGTGCG GGTGATCGAC
AATTCCGATC CGAAGAATCC GCGGCAGACG GCCGTCCTCA ACGAGCTCGG CGTGGTCACC
GGCACGTGGG AGTCGCTCAA GGTCAACGCG AAGCGCGGAC TGCTGGTGGG CACGTCGGTA
CCGCTGCTCG CGGGGTTCGG GTACATGGCG ATCTACGACA TCTCCCAGGA CTGCACCAAA
CCCCGTCTGC TCAATCCCGG TGCCGGGACG GCATTGGGGA TGCCCATCCC GATCACCACG
CACGAGGGCG ATTTCTCCCC CGACGGCAAG ACCTACTGGG CTTCGGGCCC CGTCGCCGGT
CACCTCAGCG CCGTCGACAT CACCGACCCC GCCAACCCGA TGGTGGTGTG GTCGGGCATC
ACCGGCATCT TCGGTCACGG CGTCGGCTTC TCCCCGGACG GCCGCCAGCT GTACGCCTCC
ACCGTCGCCG GGATCACCGT GATCGACGTC TCGGCGATCC AGGACCGCAA GCCCCGCACC
GTGGTCACCG CGCCGGTGCC GCACGTGGGG CGCCAGTTCT GGTTGGACGG GATCATCACC
CAGCACACCA TCTACGCGAG CTACGGCGGC AAACCCTATG CCTACGTCGT CGACGAGGCC
GGCTCCGGCG GCGTCAAACT CCTGAGCCTG AGCGACCTGT CGAACCTGAA GCTGCGCAAC
CAGATCAAGC TCGAGATCAA CCTCCCGAAG AACGCGAACC GGTGGGCGCA GAGCGCCACC
TCGAACGGCG TCTTCGGCTA CGACGCGCAC TACTGCACCA TCGACCGCCC CGACGATCCC
ACCGCCATGG CGTGCGGCTG GATCCAATCC GGTATCCGGG TCTTCGACAT CCGTGATCCC
GACAGGATCC GCGAGATCGC CTACTTCAAC CCGCCCGCGC AGACCGGAAA GAATCTGCAG
CTGCCGAACT CCACGCACGC GCTGCTCGGC TCGATCGTGG CGCCGCCGAT CCTGAACACG
CTGCAGATCG CCCGGTCGAT CCTGCAGGGC CAGGCGCCCG TGAACGGGAT CATCAACGAT
CAGAGCCGCC TGCTGGGGGC CGACCTCTCG GCGGACTGGT GCATGTCGCC CCCGGAGTTC
CGCGGCAACG ATCTTATGGT CAGCTGCATG GACAACGGCT TCATGCGGCT GCGCATCGAC
CCGAAGGCCT ACTCCCCGCA ATGA
|
|---|
| Protein sequence | MHGATRGRRS ASTRPNARRG ALRFALIAIL LLPLLAVGPQ AQAAPQGYNQ WVDVWDKSVP
KADCRPGDRA EKGIQGDVPL EDRKSGRSTQ GYNCNIDLVG RYQGDGAGIV SPSYKNCSYI
STTFPTNFAG SSGPGVRVID NSDPKNPRQT AVLNELGVVT GTWESLKVNA KRGLLVGTSV
PLLAGFGYMA IYDISQDCTK PRLLNPGAGT ALGMPIPITT HEGDFSPDGK TYWASGPVAG
HLSAVDITDP ANPMVVWSGI TGIFGHGVGF SPDGRQLYAS TVAGITVIDV SAIQDRKPRT
VVTAPVPHVG RQFWLDGIIT QHTIYASYGG KPYAYVVDEA GSGGVKLLSL SDLSNLKLRN
QIKLEINLPK NANRWAQSAT SNGVFGYDAH YCTIDRPDDP TAMACGWIQS GIRVFDIRDP
DRIREIAYFN PPAQTGKNLQ LPNSTHALLG SIVAPPILNT LQIARSILQG QAPVNGIIND
QSRLLGADLS ADWCMSPPEF RGNDLMVSCM DNGFMRLRID PKAYSPQ
|
|---|
| |