| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3473 |
|---|
| Symbol | |
|---|
| ID | 9157648 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3553674 |
|---|
| End bp | 3554645 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003648393 |
|---|
| Protein GI | 296141150 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.338124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGGT GGCTCAAAAA AACGGCGTTG ACCGTCATCG CCGTGGCGCT CAGCGCCACC
GGGCTGTATC TGCTCCGCGA TCCGAGCCCA GTGGGCTATT GGCGCTCGGC GTCCGCCCGC
GAGGCGTATC TGACCGATTA CCGGCAGGCC TTCGGCGATC TGCCACCCGC AGCCGAGACT
CGGGATGTGC GAACGAGTTA CGGGTTCGTG CGGGTGTACC GGTTCGGCGA GTCGCGGCCC
GGCACCGATC CGATCGTCCT CGTTCCCGGC CGCGCCTCGG GCGTACCGAT GTGGTCGCAG
AATCTGCCCG GTCTGCTCGC CGGACACATG GTGTACGCGA TCGATGCGCT CGGCGACGCC
GGGATGAGCG CGCAAATCGG GCCGATCCGC GACGGCGAGG ACCAGGCCAC CTGGCTGAAC
GAGACTTTCG ACGGCTTGGG GCTCACCCGG GTGAACCTGA TCGGCCATTC GTTCGGCGGA
TGGACTGCCG CCAACTACGC AACGCGTCAC CCGGATCGCG TCGCGACGTT GAGCCTGTGG
GAACCGATCC TGGTCTTCGC GGGATTGCGG TGGCAGATGT ATCTCGCGAC GCTGCCATCG
TCGATCCCCT TCCTCCCCAA GTCCTGGCGT CAGAAGGGAC TCGCCGTGAT CGGGGGTGCC
CAGGGGTCCG AGTCCACCGA GGACTCGCCC CTCGGCCGCA TGATCGATGC CGCCACCGAA
GGGTTCCGCG CGAAGCTACC CACCCCGATG CAGCTGACTT CCGACGATCT CGCCCGCCTC
ACCATGCCCA CCTTCGTGGG ACTGGGGGCG AAGAGCTCTG TGACGGACGC CGACGCCGCG
GCACGGACCG CCGAGAAGCT ACCGGCGAGC ACCGTCCGGA TCTGGCCCGA GGGAACACAC
TCCCTGCCCA TGCAGTATCC GTCCGAGCTG AATCAGGAAG TCCAGCAACT GTTCCAACGC
GCGAAATCCT AG
|
|---|
| Protein sequence | MRRWLKKTAL TVIAVALSAT GLYLLRDPSP VGYWRSASAR EAYLTDYRQA FGDLPPAAET
RDVRTSYGFV RVYRFGESRP GTDPIVLVPG RASGVPMWSQ NLPGLLAGHM VYAIDALGDA
GMSAQIGPIR DGEDQATWLN ETFDGLGLTR VNLIGHSFGG WTAANYATRH PDRVATLSLW
EPILVFAGLR WQMYLATLPS SIPFLPKSWR QKGLAVIGGA QGSESTEDSP LGRMIDAATE
GFRAKLPTPM QLTSDDLARL TMPTFVGLGA KSSVTDADAA ARTAEKLPAS TVRIWPEGTH
SLPMQYPSEL NQEVQQLFQR AKS
|
|---|
| |