| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3459 |
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| Symbol | |
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| ID | 9157634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 3540686 |
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| End bp | 3542059 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | Integrase catalytic region |
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| Protein accession | YP_003648380 |
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| Protein GI | 296141137 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00200761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATTCAC CGATGGTGAA GAAGAGGTTC TTCAAGGAAT TGGACGTGTC TGACGGCAAT
GTGTCGGTCG CTGCTAGGGC GGCGGGGGTG ACAGTGAATA CGGCGTTTGG ATGGATGCGC
AGGGCGGGCC TGCGTGGACG TGGGAGCACT AGCAATGGTG GTCATCCCGG CCGGGCCGAG
TACGACCGGC TTCGCCGTGA GGGGGTGCTG CGGCCGGACG CTGCTCGGCG TGTCGGTGTC
AGCGTTCGCA CTGCTGGGGA CTGGGATCGA GGGGTGCGCA AGATTGGCGA TACTCGTATC
CATCCCGACG GACGCAAGAT CGATTACCTG ACAGGTGCGG TCACGTGGGT CGGAGTGGAA
TCGGATGCAC CGAGGCAGCG GAGCCTGCAT CCACGGTTTC TGACCTTGAC CGAGCGGGAA
ACTATCGCTG ACATGCGCCG CGAGGGGGCA TCGCTGCGGG CCATCGGCAG GGAGCTCGGC
CGGCCAGCAT CGACGATCAA ACGGGAGATC GACGCTGGCG TTGTCAACGG TGCCTATCGC
CCGCATCAGG CGCACCGCAG GTGGGAAAAG AGCCGGTCAC GGCCGAAGCC AGCGAAACTG
GCCCAGGCCG GTCCGCTGCG GGACTACGTC GAGAACAAAC TGCAGGACCA GTGGTCCCCA
GAGCAGATAT GTCACTCTCT AGTGACCGAG TTCCCCAACG AGCAAAGTAT GCGTGTGAGC
GTCGAGACGA TCTACCAGTC GATCTACGTT CAGGCTCGGG GCGGCCTGCG CCGTGAAGTC
GCGATGGCCT TGCGAACGGG CCGCACCCGC CGCAAGCCCC ACCGCCGCGC CGAACATCGC
ACCAGACGAT TCGTCGACAA GATGGTGATG ATCTCCGACC GGCCCGCCGA GGTCGAGGAT
CGAGCCGTGC CAGGCCACTG GGAAGGTGAC CTGATCGTCG GTACTCGCAG CGAGTCCGCG
ATCGTCACAC TCGTCGAACG CTCCACCCGC TACGTCATGC TCGGCCACCT GCCTGGCGGC
CACTCCGCCG AAGAAGTCCG TGACGTGCTG GTTTCGTTGA TCGGAAATCT CCCAGGACAT
TTGCGGGGAT CACTGACCTG GGACCAGGGC TGCGAGATGG CCGCCCACCA ACAATTCACG
GTCGCCACCG GGGTTCCGGT CTACTTCTGC GATCCCCACT CACCCTGGCA GCGCGGAAGC
AACGAGAACA CCAATGGACT ACTGCGCCAG TACTTCCCGA AAGGCACCGA CCTGAGCGCC
TACGGCCGCG AAGACCTCGA ACTCGTCGCC CAGAAACTCA ATCGCCGACC ACGCAAAACG
CTCGGCTGGA AGACACCAGC CGAGCGTTTG CGTGACCTCA TTACAGCTCG CTAG
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| Protein sequence | MHSPMVKKRF FKELDVSDGN VSVAARAAGV TVNTAFGWMR RAGLRGRGST SNGGHPGRAE
YDRLRREGVL RPDAARRVGV SVRTAGDWDR GVRKIGDTRI HPDGRKIDYL TGAVTWVGVE
SDAPRQRSLH PRFLTLTERE TIADMRREGA SLRAIGRELG RPASTIKREI DAGVVNGAYR
PHQAHRRWEK SRSRPKPAKL AQAGPLRDYV ENKLQDQWSP EQICHSLVTE FPNEQSMRVS
VETIYQSIYV QARGGLRREV AMALRTGRTR RKPHRRAEHR TRRFVDKMVM ISDRPAEVED
RAVPGHWEGD LIVGTRSESA IVTLVERSTR YVMLGHLPGG HSAEEVRDVL VSLIGNLPGH
LRGSLTWDQG CEMAAHQQFT VATGVPVYFC DPHSPWQRGS NENTNGLLRQ YFPKGTDLSA
YGREDLELVA QKLNRRPRKT LGWKTPAERL RDLITAR
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