Gene Tpau_3450 details

Gene Information

• Locus tag: Tpau_3450
• ID: 9157625
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3535435
• End bp: 3536145
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 64%
• Product: hypothetical protein
• Protein accession: YP_003648372
• Protein GI: 296141129

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.723743
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCAG ACGAATTGTT CCGATACTCG CGGATGCCCG AGGGCGAGGA CTGGAAAGAG 
ATCTTCGACC GGTATCCCCA GTCGTTCGTC CACGGCAAAG ACGGGTTCGA TCGACGCCTG 
ATCGACGACC TCGACGCAGT CGGCGTCCGC GTGACCCACC TCGATCACAT CGTGGGGTTG 
CCCACCGTTC CACCCGCGGT CGGCGTAGCA GCCGACTGGC TCACCCACCT CGACGAGCGG 
ATCCCCGGCG ATGAAACCCG GCACAAACAG GGGATACGCC ACAGTCTCAT CAACCTTCTC 
AACGATCCCG CCGCGAAAGG CAACCAAGCC GCGATCGAGG CACTGTCGGC TCAGATCGAG 
CGGTCCGATC CCCCCCTCCC CGAATACGCA CAGATTTGGG CTATCACCAG CCTGGCGCGC 
ATCGCCACCA AAGACGACTA CCAGCGCATG ATGGACCTCT TCAACCGACC CGATATACAC 
GACGGCGGCC GTTCGGCCAT CGTCGCCTAC TTCGGTCGAT TCCGTCGCCC GGAATCCCGC 
GAGGCCGCCT TGTCCAGCAT GGACCGGCCG ATCGTCCGGG CCGAAGCGAT CCGCACGCTC 
GGCAAGATCG GCAACCCGGA CGACATCGCC GTCATCGCCC CGTACGAGAA CGACGACGAC 
CCCCACGTGC GCCGCGCGGC CCGCACCGCA CTGAAAAGAC TCCGCTCATG A 

 

Protein sequence

MSADELFRYS RMPEGEDWKE IFDRYPQSFV HGKDGFDRRL IDDLDAVGVR VTHLDHIVGL 
PTVPPAVGVA ADWLTHLDER IPGDETRHKQ GIRHSLINLL NDPAAKGNQA AIEALSAQIE 
RSDPPLPEYA QIWAITSLAR IATKDDYQRM MDLFNRPDIH DGGRSAIVAY FGRFRRPESR 
EAALSSMDRP IVRAEAIRTL GKIGNPDDIA VIAPYENDDD PHVRRAARTA LKRLRS