Gene Tpau_3442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3442 
Symbol 
ID9157617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3526479 
End bp3527090 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648365 
Protein GI296141122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTGGC TCTCTATTCA CGATCCCGAC GGCCCGGTGC GGGCGACGCT GATCCTGGCG 
CACGGCGCGG GCGGTAACCG CGACGCGGCC GTATTGCGGT TGCTCGGTGA GGAATTGGCG 
CAACGCGCGG TGCGCACCTT GCGCATCGAC CTGCCCTATC GCCGGGTGCG CCCGAAGGGT 
CCGCCGTCAC CGTCCGGGCA GGCCGCCGAT CGTGCGGCTT TCGCCGAGAC CGCACGCCTA 
CTGGAGATCG ACGGTCCCGT GATCTGGGGC GGGCACAGCT ACGGCGGGCG CATGGCGTCG 
ATGGCCGTCG CGGAGGGCCC CGATCGCCCC GACGTGCTGC TGTTGTCCTC GTACCCGTTG 
CACCCGCCCG GCCGGCCCGA GAAGGCACGC ACGGCCCATC TGCCGGACAT CGCGATTCCG 
ACCGTGTTCG TGCACGGCAA GCGCGATCCG TTCGCCACAT CGCACGAGCT GGCCGATGCC 
GCAGCGCTCG TCACCGGCCC CACCACCGTG GTCGAAGTGT CCGCGGCGCA CGACCTGGCA 
CCGGCGAAAT CGGGTGCACC GGCGAAGGCC GCCGACGCCG TCATCGCGGC GCTGGATCAG 
CTGAACGCGT AG
 
Protein sequence
MTWLSIHDPD GPVRATLILA HGAGGNRDAA VLRLLGEELA QRAVRTLRID LPYRRVRPKG 
PPSPSGQAAD RAAFAETARL LEIDGPVIWG GHSYGGRMAS MAVAEGPDRP DVLLLSSYPL 
HPPGRPEKAR TAHLPDIAIP TVFVHGKRDP FATSHELADA AALVTGPTTV VEVSAAHDLA 
PAKSGAPAKA ADAVIAALDQ LNA