Gene Tpau_3440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3440 
Symbol 
ID9157615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3524623 
End bp3525330 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648363 
Protein GI296141120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAGCA CCCCCGCGCC CCGCGCCCGG ACCTCCGCTG CGTCCCTCGC CGTCGCAGCC 
GCCGTCGTCG CGCTCGTGCC CGCCGCCGCG AATGCTGAGC CGGTCGCCTC GGTCACCCCC 
GGCAGCTCGG TACTCACGGT CACCAAGATG ACCGGCAATG TGGCCGACGG CCGCGGCTGC 
ACCGTCGGCT TCATCGGTCA GCGTCAGGAC GGCACCCGGG TCGGCGTGTA CGCCGGCCAC 
TGCGGCGCCC AGGGGCAGCG GGTGGTCGTC GACGGCCGCA TCGCCGGCGT CAACGTCGCC 
TCCTCGGCTC CGGCACTGAC CAAGACCGAC ACCTTCGTCG TGCCCAACGC CCCGGACTGG 
GGCGTCTTCG AACTCGATCC GCGCGTCGCC CGCGCCACCC CCGGAGGCAA GATTCGCCCG 
GCGAGCGTCG GCGTCGCCAA GCCGGGCGAC CCCGTGTGCA GCCAGGGCGT CAGCTCGGGC 
TGGCGCTGCG GCACGGTGAT CAGCGTGGAC AACGGCTACA TCGCCACCAC CATCGGGGTC 
CAGGTCGGCG ATAGCGGCGG CCCGCTGGTG CGCAGCACCG ACAACGCCGC CCTCGGCCTG 
GCTTCGCGCG CCGCCACCTT CGACGGCGCG TCCAAGCCCA ACGGCTCGCT GTTCTACGAC 
GTCTCGGCCG CTCTCAACGC CGCCGGTCTC GCGCTCGTCG TCGGCTAG
 
Protein sequence
MRSTPAPRAR TSAASLAVAA AVVALVPAAA NAEPVASVTP GSSVLTVTKM TGNVADGRGC 
TVGFIGQRQD GTRVGVYAGH CGAQGQRVVV DGRIAGVNVA SSAPALTKTD TFVVPNAPDW 
GVFELDPRVA RATPGGKIRP ASVGVAKPGD PVCSQGVSSG WRCGTVISVD NGYIATTIGV 
QVGDSGGPLV RSTDNAALGL ASRAATFDGA SKPNGSLFYD VSAALNAAGL ALVVG