Gene Tpau_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3439 
Symbol 
ID9157614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3523992 
End bp3524477 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648362 
Protein GI296141119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACA CCACCGGCAC GTACAAGCTG TGGCGCAAGC TCAGCGATAA GCCGCTCGGC 
AAGCTCGCCT TCTCCGCCGG CGCCTCCCTC AAGGCCCCCT ACTTCGCCTC GGTGACGCCG
TACGTCGCGG AGCTCGAGTA CGGCCACGCC GTGGTCAAGG GTCCGAAGTG GTGGTTCGTG
CAGAACCACA TCGGCACCTT CCACGCGATC GCCGCCTGCA ACCTGGCGGA GGTCGGGATG
GGGATGGTGA TGGAGGCGTC CACCCCGGCC AGCCATCGCT GGTTGCCGAA GTCGATGAAG
GTGGACTACC TGGCCAAGGC GGAATCGTCG CTCACGGCGA CCGCCAGCTT CCTGGAGCCG
GTCGACTGGG ACGCGATCAC CGCGGGCCAG GACGTGGTGG TCGACATCGC GATCCGCGAC
AACAAGGGCA CCGAGGTGGT GCACGCCCAG ATCACCACCT GGGTCACACC AAAGCCCGCG
AAGTAG
 
Protein sequence
MTDTTGTYKL WRKLSDKPLG KLAFSAGASL KAPYFASVTP YVAELEYGHA VVKGPKWWFV 
QNHIGTFHAI AACNLAEVGM GMVMEASTPA SHRWLPKSMK VDYLAKAESS LTATASFLEP
VDWDAITAGQ DVVVDIAIRD NKGTEVVHAQ ITTWVTPKPA K