| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3424 |
|---|
| Symbol | |
|---|
| ID | 9157599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3514278 |
|---|
| End bp | 3515708 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003648347 |
|---|
| Protein GI | 296141104 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGCAC CTTCCTTCAC CGACCTCGGC GTGCCCGCCG GCGTCGTCGA CGCCCTCGTC
GCGATGGATC GGCCCACCCC CTTCCCCATC CAGGCCGATA CCCTGCCCGA CACCCTCGCC
GGCCGCGACG TGCTGGGCCG CGGAAAGACC GGCTCCGGCA AGACGCTCGC CTTCGCGATC
CCGCTGGTCG TGGCGGTCGA CGAGGCTCGC GGCTCGCGCC GCCGGCCCGG CCGCCCCGTG
GGCCTGGTGC TCGCGCCCAC CCGCGAGCTG GCCACCCAGA TCACCGCCAC CGTGGAACCG
CTGGCCAAGG CCCTCGGCCT GACCGTGACC ACCATCTTCG GCGGGGTCAA GCAGTCCCGT
CAGGAGCAAG CGCTCGCGGC CGGCGTCGAT ATCGTGGTGG CCTGCCCCGG CCGCCTCGAG
GACCTGATGC GTCAGCGCAT CGTCGATCTG TCCGACGTGG CCGTCACCGT GCTCGACGAG
GCCGACCACA TGGCCGACCT GGGCTTCCTG CCCGTGGTCA CCCGGATCCT CGCCGCCACC
CCGTCCGACG GGCAGCGCAT GCTGTTCTCG GCGACGCTCG ACAACGGCGT CGACAAGCTG
GTGCGCAAGT TCCTCTCCGA GCCCGTGATG CACTCCGTCG ATCCGGAGAA CTCGCCGGTC
GCCGATATGA CCCACCACGT CTTCGAAGTG AGCGGCAAGG ACGACAAGTC CGAACTGGTG
CGCGTGCTCG CCTCCGGCAT GGGCCGACGC ATCCTGTTCA CTCGCACCAA GCACCAGGCC
AAGAAGCTGG CCAAGCAGCT CACCGCGCAG GGCATCCCCG CCCGCGATCT GCACGGCAAC
CTGAGCCAGC CGCAGCGCGA CCGGAACCTG GAGGCCTTCA GCACCGGCGC CGCCCGCGTG
CTGGTCGCCA CTGATATCGC CGCCCGCGGC GTGCACGTCG ACGACATCGA GCTGGTCGTG
CACGTCGACC CGCCCGCCGA GCACAAGGCC TACCTGCACC GCAGCGGCCG CACCGCCCGC
GCGGGCAGCG CCGGCACCGT GGTCACCGTG ATGCTCACCG AACAGAAGCG CGACACCGTG
GCCCTGCTCA AGAAGGCCGC GATCAGTGCG CGTCCCGTCG CGGTCACCGC GACCGCGCCC
GTGGTGACCG AACTCGTGGG CGCGCCCGCA CCGTTCGTCA AGCCCGCGCC GGAACCCGCG
CCGCAGCAGC AGCGCCGGGC CGGCGGCGGA CACGCGCCGG GCCGGGGTCG TGCCGGCCGC
GGCAAGGGCA CCGGCCCGCG GTCCGACGCA GCCGGACGCG GCCAGGGCGG GCAGGCCCGC
GGTGGCCAGC AGCGTTCCGG GCAGCGCCAG GCGCCGTCGG GCCAGGGCCG GCCGCAGAGT
CAGGGGCGCG CCCAGCAGCC CCGCCGCCGC GCCACCCGCC CCGCGGGCTG A
|
|---|
| Protein sequence | MSAPSFTDLG VPAGVVDALV AMDRPTPFPI QADTLPDTLA GRDVLGRGKT GSGKTLAFAI
PLVVAVDEAR GSRRRPGRPV GLVLAPTREL ATQITATVEP LAKALGLTVT TIFGGVKQSR
QEQALAAGVD IVVACPGRLE DLMRQRIVDL SDVAVTVLDE ADHMADLGFL PVVTRILAAT
PSDGQRMLFS ATLDNGVDKL VRKFLSEPVM HSVDPENSPV ADMTHHVFEV SGKDDKSELV
RVLASGMGRR ILFTRTKHQA KKLAKQLTAQ GIPARDLHGN LSQPQRDRNL EAFSTGAARV
LVATDIAARG VHVDDIELVV HVDPPAEHKA YLHRSGRTAR AGSAGTVVTV MLTEQKRDTV
ALLKKAAISA RPVAVTATAP VVTELVGAPA PFVKPAPEPA PQQQRRAGGG HAPGRGRAGR
GKGTGPRSDA AGRGQGGQAR GGQQRSGQRQ APSGQGRPQS QGRAQQPRRR ATRPAG
|
|---|
| |