Gene Tpau_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3395 
Symbol 
ID9157570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3487517 
End bp3488311 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content71% 
IMG OID 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003648318 
Protein GI296141075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAGGT TCCGCCGCAA CAAGACCGTG CCCTTCCGCT CCGCGGGAGA GCTCGACGCG 
ATGGCCGCCG CGGGCGCCGT CGTGGGCCGC GCGCTCGTCG CGGTCCGCGA GGCCGCCCGC
GTCGGCGTTT CCACCCTCGA ACTCGACGAG GTCGCCGAGA CGGTGATCCG TGAGGCCGGC
GCGACCCCCT CGTTCAAGGG CTACCACGGC TTCCCCGGCT CGATCTGCTC CTCGGTCAAC
GACGTGGTCG TGCACGGCAT CCCCGACCGC TCGACGGTCC TGGCGCCGGG AGATCTGGTC
TCGATCGATT GCGGCGCCAT CCTCGACGGC TGGCACGGCG ACTCCGCGTG GACCTTCGGC
GTCGGCGAAC TCGCCCCCGA AGACGAGGAT CTGTCCGAGG CGACCCGACT CGCCATGGAG
GCGGGGATCG CCGCGATGGT CGACGGTGCA CGCCTGACCG ACGTCTCGCA CGCCATCGAG
ACCGCCACCT ACGCGCAGTC CGCCCGGCTG GGCCGTGACT TCTTCATCGT CGACGGCTAC
GGCGGGCACG GCATCGGCCG GGAGATGCAC ATGGAGCCCT TCCTCGCCAA CGAGGGCGAC
CCGGGGAAGG GGCCGCGGCT CGTCGTGGGC TCCACTCTCG CCATCGAGCC GATGCTCACC
CTCGGTACCG CGGATACCTC CGTGCTGGAG GACGACTGGA CCGTCGTGAC CGACGACGGT
TCCCGGTCCG CCCACTGGGA GCACACCGTC GCCGTTACCG CCGACGGTCC GCGCATCCTC
ACACCGCGTC CCTGA
 
Protein sequence
MSRFRRNKTV PFRSAGELDA MAAAGAVVGR ALVAVREAAR VGVSTLELDE VAETVIREAG 
ATPSFKGYHG FPGSICSSVN DVVVHGIPDR STVLAPGDLV SIDCGAILDG WHGDSAWTFG
VGELAPEDED LSEATRLAME AGIAAMVDGA RLTDVSHAIE TATYAQSARL GRDFFIVDGY
GGHGIGREMH MEPFLANEGD PGKGPRLVVG STLAIEPMLT LGTADTSVLE DDWTVVTDDG
SRSAHWEHTV AVTADGPRIL TPRP