Gene Tpau_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3390 
Symbol 
ID9157565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3483018 
End bp3484343 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content70% 
IMG OID 
ProductO-acetylhomoserine/O-acetylserine sulfhydrylase 
Protein accessionYP_003648313 
Protein GI296141070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACTC CGGACAGCCC CGCCTGGCAC TTCGAGACCA CGCAGATCCA CGCCGGGCAG 
ACGCCCGACG GTGCGACCAA CGCGCGTGCG CTCCCGATCT ACCAGACCAC GTCGTACACG
TTCAACAACA CCGATCACGC CGCGGCGCTG TTCGGGCTGG CCGAGCCGGG CAACATCTAC
ACCCGGATCA TGAACCCGAC CCAGGACGCG GTCGAGCAGC GGATCGCCGC TCTCGAGGGC
GGCGTCGCGG CGCTGCTCGT GGCGTCGGGC CAGGCCGCCG AGACCCTCGC GATCCTCAAC
GTCGCGGAGT CGGGCGACCA CATCGTGAGC TCCCCCTACC TGTACGGCGG CACCTACAAC
CTGCTGCACT ACACGCTCGC CAAACTGGGC ATCGAGGTCA CCTTCGTCGA GAACCCCGAC
GACCTGGAAC AGTGGCGCGC CGCCGTCCGC CCCAACACCC GCGCCTTCTT CGCCGAGACG
ATCGCGAACC CGCGCGGACA CGTGCTCGAC GTGGCCGGCG TGGCCGGTGT CGCGCACGAG
AACGGCGTAC CGCTCATCGT CGACAACACC GTGGCCACCC CGTACCTGCT CAACCCGCTC
GCGCACGGCG CCGACATCGT GGTGCACTCG GCCACCAAGT ACCTCGGCGG CCACGGCTCG
GCGATCGGCG GCGTCATCGT GGACGGCGGG AAGTTCGACT GGACGCAAGG CCGGCACCCG
AACTTCACCA CGCCGGACCC GTCGTACCAC GGCGTCGTCT TCGCCGACCT CGGCGAGCCC
GCCTACGCGC TCAAGGCCCG CGTGCAGCTC CTGCGTGACC TGGGCCCGGC GATCTCCCCG
TTCAACGCCT TCCTGCTGTC GCAGGGGATC GAGACGCTGA GCCTGCGGGT GGAGCGGCAC
GTCGAGAACG CGCAGAAGGT GGCCGAGTTC CTCTCCGGTC AGGACGGCGT CACCGAGGTC
ATCTACGCCG GGCTGCCCTC GTCGCCGTAC TACGAGCGCG CGAAGTCGCT GCTGCCCAAG
GGCGCCGGCG CCATCGTCGC CTTCGAGCTG TCCGGCGGCG TCCCCGCGGG CAAGGCCTTC
GTGGACGCCC TGCAACTGCA CAGCCACGTC GCGAACATCG GCGACGTCCG CTCGTTGGTG
ATCCACCCGG CCTCGACGAC CCACTCGCAG CTCACCGAGC AGGAGCAGCT CGAGGCCGGC
GTCACGCCGG GCCTGGTGCG CCTCGCGGTG GGCATCGAGC ACATCGACGA CATCCTCGCC
GATCTGCGGG TGGGCCTCGC CGCCGCGGCA TCAGCGCAGG TTCCCGCCGC GGCCGGCGCG
TCGTAG
 
Protein sequence
MSTPDSPAWH FETTQIHAGQ TPDGATNARA LPIYQTTSYT FNNTDHAAAL FGLAEPGNIY 
TRIMNPTQDA VEQRIAALEG GVAALLVASG QAAETLAILN VAESGDHIVS SPYLYGGTYN
LLHYTLAKLG IEVTFVENPD DLEQWRAAVR PNTRAFFAET IANPRGHVLD VAGVAGVAHE
NGVPLIVDNT VATPYLLNPL AHGADIVVHS ATKYLGGHGS AIGGVIVDGG KFDWTQGRHP
NFTTPDPSYH GVVFADLGEP AYALKARVQL LRDLGPAISP FNAFLLSQGI ETLSLRVERH
VENAQKVAEF LSGQDGVTEV IYAGLPSSPY YERAKSLLPK GAGAIVAFEL SGGVPAGKAF
VDALQLHSHV ANIGDVRSLV IHPASTTHSQ LTEQEQLEAG VTPGLVRLAV GIEHIDDILA
DLRVGLAAAA SAQVPAAAGA S