Gene Tpau_3389 details

Gene Information

• Locus tag: Tpau_3389
• ID: 9157564
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3482412
• End bp: 3482957
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 70%
• Product: NUDIX hydrolase
• Protein accession: YP_003648312
• Protein GI: 296141069

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGCG ATGAGGTGGT GGCGCTCTAC GACGACGCGG GGCGCCCGTA CGGTGCGGCG 
ACCCGCACTC GGGTGCGTGC CGCGAACCTG CGGCACGGCA CCACTGCGAT CCTGGTCTTC 
GACAGCGCCG ACCGCATCTA CGTGCACCGT CGCACCGCGG TCAAGGACGT CTACCCCGGT 
CTGCGTGACT TCTGCGCGGG TGGGGTGCTC CTGGCAGGGG AGTCGCCCGA CGACGGTGCC 
GCGCGGGAGG CCTTCGAGGA GCTCGGGGTG CACGGCGTCG AGCTGGTGCG GGTCGGTACG 
GCCGATTACG CCGATCCGAT GACCCGGTTC GTGTGCTTCC AGTACGTCTG TACCTACGAC 
GGTGCGATCG TCTGGCAGCC GGAGGAGGTG TCCGGCGGTG AATGGATGAC GCGTTCCGAC 
CTGCTGGCGG CGGTCGCCGC CGACCCGGGC GACTTCGTGC CCGACTCGGT CGAGACCGCG 
CTGCACCTGG TGAAGGGTGG GGTGGCGCCG ACGACGGGTT TCGGCCGGGA TTCGTCCGAC 
GAGTAG 

 

Protein sequence

MAGDEVVALY DDAGRPYGAA TRTRVRAANL RHGTTAILVF DSADRIYVHR RTAVKDVYPG 
LRDFCAGGVL LAGESPDDGA AREAFEELGV HGVELVRVGT ADYADPMTRF VCFQYVCTYD 
GAIVWQPEEV SGGEWMTRSD LLAAVAADPG DFVPDSVETA LHLVKGGVAP TTGFGRDSSD 
E