Gene Tpau_3365 details

Gene Information

• Locus tag: Tpau_3365
• ID: 9157540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3465090
• End bp: 3465674
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 60%
• Product: MspA family protein
• Protein accession: YP_003648288
• Protein GI: 296141045

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAGTACC TGAAGAACTC CGAGGGCGCT GCCGCGAAAA TTGCATTGTT CGACATGAAG 
GCACGGATAT TCCCACCCCT GGCGGGTGAC CAGAAATCAC GCCTGGCGTA CGTCGACGGG 
AAGGCGGAAA CGTCGATCAC CGCCGGCGAA GGGCTCACCT CCGCTTCGAT CGAAGTCGGA 
TACGTCGTGG CGTGCGGAGT GAAAGACGGA GGCTTCGAGT CGTGGATCGG CACCAATCAA 
TCGATTGGAT CGACGGTCGG AGCAGGAGCC GGGGGCGGTT TCGGCGGACC ATTCCCCTGG 
GGCGGCGTAG GAGTCGGAGG CTCGGTCAAC GGTCAACTCG GAATGAGTCA GAACCAGGTC 
ATCAAGACCG CGCCCGGAAC CATCCAATAC TTCCCTGTTG GCGTCAAAGA GATCGCGAAT 
CCGAAACCGG GCGAGAAATT CGGCGTACGA TTCGCCGAGA AGCGAATCAG TGTCGAAGGA 
TGTATTGGCA GCGTGGACGC AGTCGCTTAT GCGACCGGAA AACTGTCGAC CCGCTACTTC 
GACGACGCCA AGACGGCGTA CAGCGAAATC ATCCGACTCG CGTAG 

 

Protein sequence

MQYLKNSEGA AAKIALFDMK ARIFPPLAGD QKSRLAYVDG KAETSITAGE GLTSASIEVG 
YVVACGVKDG GFESWIGTNQ SIGSTVGAGA GGGFGGPFPW GGVGVGGSVN GQLGMSQNQV 
IKTAPGTIQY FPVGVKEIAN PKPGEKFGVR FAEKRISVEG CIGSVDAVAY ATGKLSTRYF 
DDAKTAYSEI IRLA