Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3349 |
Symbol | |
ID | 9157523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3450020 |
End bp | 3450892 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | DNA-formamidopyrimidine glycosylase |
Protein accession | YP_003648272 |
Protein GI | 296141029 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGAGC TTCCCGAGAT CACCGCCATC GCGCAGTACG TGGCCGAGAA GGCAGTGGGA ACCACCGTCC GCCGCGTCGA TGTGGCGGCC CTGTCCGTGC TCAAGACGTT CTCGCCCGGT CCGCACGAGC TGGTGGGAGC CACCGTGACC GGCACCGATC GGATCGGCAA GTACTTCGTG CTGTGGACCG AGAAGGAGGG CGCCAGAGTC GCACTCGTGG TGCATCTCTC ACGCGCCGGG TGGTTGCGCT GGTCCGAGAA GCTCGCGCCC ACCCCGCTGA AACCGGGTGG AAAGTCGCCG ATCGCGCTGC GGGTGCACGT CGGGCCGGAG GGCGAGGGCT TCGATCTCAC CGAGGCCGGC ACGCAGAAGC GGCTCGCGGT GTGGATAGTC CACGATCCCA GCGAGATCGA GATGGTGGCC ACCTTGGGGC CGGATGCACT CACGGTGAGC CGAGCGGAGT TCGGAGCGAT TCTCGCCGGG TCCCGGGCGC AGCTGAAGAA CCTGCTCCGC GATCAGCGCA CGATCGCAGG CATCGGTAAC GCCTACTCGG ACGAGATACT GCACACCGCC AAGCTCTCGC CCTTCGCCGG CGCGAAATCG CTCGATGAGG CACAGACCGA TGCGTTGTAC GCCGCGATGC ATACCGAACT CGACGATGCG GTGGCGCGCT CCGTGGGCCA GCACGTCGCC ACCCTGAAAG CGGAGAAGCG GTCGGGGATG AAGGTGCACG GCCGCACCGG CAGCCCCTGC CCGGTGTGCG GAGACACCGT GCGGGAGGTG TCCTTCGCCG ACCGCTCGTT CCAGTACTGC CCCACCTGTC AGACCGGCGG CAAGATCCTC GCCGACAGAA GGTTATCGAA GCTACTGAAA TAG
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Protein sequence | MPELPEITAI AQYVAEKAVG TTVRRVDVAA LSVLKTFSPG PHELVGATVT GTDRIGKYFV LWTEKEGARV ALVVHLSRAG WLRWSEKLAP TPLKPGGKSP IALRVHVGPE GEGFDLTEAG TQKRLAVWIV HDPSEIEMVA TLGPDALTVS RAEFGAILAG SRAQLKNLLR DQRTIAGIGN AYSDEILHTA KLSPFAGAKS LDEAQTDALY AAMHTELDDA VARSVGQHVA TLKAEKRSGM KVHGRTGSPC PVCGDTVREV SFADRSFQYC PTCQTGGKIL ADRRLSKLLK
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