Gene Tpau_3348 details

Gene Information

• Locus tag: Tpau_3348
• ID: 9157522
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3447910
• End bp: 3449943
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 70%
• Product: iron permease FTR1
• Protein accession: YP_003648271
• Protein GI: 296141028

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTGGG GTGATGCCGT CCCGAACTTC CTGATCGGCC TGCGAGAGGG TCTGGAAGCG 
GGACTGATCG TGAGCATCCT GCTGGCCGCC GTGAAGAAGT CGGGTGGTTC GCGGGTGCCG 
GTGTGGTTGG GTGCGCTGGG CGCGGCCTCG TTGTCGGTGA GTTTCGGCGC GGTGCTGACC 
TTCACCACGT CCGAGATGTC CGCGACCGCG CGCGAGGTCG TCGCAGGCAC ACTCAGCGTG 
GTCGCGGTGA TCCTGGTGAC GATCATGATC TTCTGGATGC GGCGCACTGC GGCCACCCTG 
TCGAAGGGGT TGCGTGGCGA TGTCGAGGCC GCGATGGCGC TCGGCGCGGG CGCCCTGGTG 
CTCACCGCGT TCTTCGCCGT GGCCCGCGAG GGCCTGGAGA CCACGCTGTT CCTGTGGACC 
GCGGCCCGTG CCTCGGGCGA CGCCGTGGGC CCGGCCGTCG GCGCCACGCT CGGCCTGCTC 
GTCGCCTTCG GGCTGTGCGT TCTGCTCTAC CGGCAGGCGG TCCGTCTCGA CCTGGGGAAG 
TTCTTCGGGT ACACCGCGGT CCTGCTCATC GTGGTGGCCG CGGGTGTGCT CTCCTACGGC 
CTGGGCGACC TGCAGAACGC GGGGGTACTG CCGGGACGCA CCTGGATCGC CTTCGATCTG 
ACGGGCACCG TCAACCCCGA CGCCTGGTGG GTGGCGTTGC TGTCCGGGAT CACCAATCTC 
GCGCCGAAGA TGACGGTGCT CCAGGTGTTC GCCTGGCTCG CCTACCTGGT GGTCGTGCTG 
TGGGCCTTCC TGCGGACCAC ACCCGCGCCG CCCGACGCGC ATCGCAAGAG TCGGTTCGAG 
ACCTGGGCCG AGAGCCTCGC GGGCCGGCAG GTGTGGCCGG TGGCCGCGGT CATCGTGGTG 
GTGCCGCTCC TGGTGGCCGG TCTGATCATC GCCGTCCTGC CGTCGAAACC GGCCGTCGCC 
GAGTCGGTGA CGGTGACCGC CGAGGACTGC GCCCGCGAGT TCAGCGGCGC GGGCCCGGGT 
CTGCAGCGGA TCTCGGTGAC CAATAAGTCG GGGAAGTCGG GCGAGATCAA CCTCGTCGAC 
GGCGGGGGAG CCGTGGTCGG CGAGATCGAG ACCATCGGCC CGGCTACCAC CGCCGACCTG 
TCCGCGACAT TGGGCAACGG CACGTACCAG TTCGTCTGCT ACCTCGCGGG CCAGCAACCC 
ACCCGGTCGG CCCAATTCAC CGTGACCGGC GGCACGGGCG AGGCGCCCCG GGCCGTCGAC 
CGGGTGACCA AGGCTGATCT GGAGGGAGTG AACGCGAAGT ACCAGGACTA TGTGCTCGAG 
GTCCTCCCCG CGGTCGAGGC GGCGCTCGGC CGCGTCCGGT CCGCGTTGGC CGCCGGCGAT 
GTCGACGGTG CGAAACGGGC CTGGCTCGAC ACCATGACCG CATGGGAGCG GGTCGGCGCC 
TCGTACAACA GCTTCGGTGC TGCCGGGACC GCTGTCGCGG GTCTGCCCGA CGGGTTCGCC 
GGCGGGGTTC GCGATCCGGA GTTCTCCGGT ATCCGGCGCA TCGAGTACGG GCTCTACCGC 
GGTGAGACCC CCGCGGGCGT GATCGCACAG GTCGACAAGA CCTCGGAGGG GCTGCAGAAG 
ATCCGTGCCG ATCTGCGCAC CGACGACATC GCGGGCGATC CGGTGACGCT CACCAAGCGT 
GCACAGGAGA TCCTGGAGGA CGCGTTGCGC GACCACCTCA CCGGAGTGAG CGATCAGGGT 
GCGCACGCGG GCTACGCTGC CACCGCCGCG AACGTCGACG CCACCCGTGC AGTGCTGCGG 
ATCGTCGAGC CGCTGCTGGT GACGCGCGCC CCCGACCTGG TGCCCACCGC ACGCCGTGAG 
CTCGACGAGG TGACCCGGGC CCTGGACGCG GTGAAGCGCC CGGACGGGAC CTACCCGCCC 
ATCGACGCCC CGCCGCTCGC CCTGCGACAG AAGATCAACG GCACCGTCGG CCAGGCGTTG 
GAGACGCTCT CGGCCGTGCC CAACCTCCTG GAGATGCCCA AGCATGAGCG ATGA 

 

Protein sequence

MNWGDAVPNF LIGLREGLEA GLIVSILLAA VKKSGGSRVP VWLGALGAAS LSVSFGAVLT 
FTTSEMSATA REVVAGTLSV VAVILVTIMI FWMRRTAATL SKGLRGDVEA AMALGAGALV 
LTAFFAVARE GLETTLFLWT AARASGDAVG PAVGATLGLL VAFGLCVLLY RQAVRLDLGK 
FFGYTAVLLI VVAAGVLSYG LGDLQNAGVL PGRTWIAFDL TGTVNPDAWW VALLSGITNL 
APKMTVLQVF AWLAYLVVVL WAFLRTTPAP PDAHRKSRFE TWAESLAGRQ VWPVAAVIVV 
VPLLVAGLII AVLPSKPAVA ESVTVTAEDC AREFSGAGPG LQRISVTNKS GKSGEINLVD 
GGGAVVGEIE TIGPATTADL SATLGNGTYQ FVCYLAGQQP TRSAQFTVTG GTGEAPRAVD 
RVTKADLEGV NAKYQDYVLE VLPAVEAALG RVRSALAAGD VDGAKRAWLD TMTAWERVGA 
SYNSFGAAGT AVAGLPDGFA GGVRDPEFSG IRRIEYGLYR GETPAGVIAQ VDKTSEGLQK 
IRADLRTDDI AGDPVTLTKR AQEILEDALR DHLTGVSDQG AHAGYAATAA NVDATRAVLR 
IVEPLLVTRA PDLVPTARRE LDEVTRALDA VKRPDGTYPP IDAPPLALRQ KINGTVGQAL 
ETLSAVPNLL EMPKHER