| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3344 |
|---|
| Symbol | |
|---|
| ID | 9157518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3443881 |
|---|
| End bp | 3445329 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family with aminotransferase domain |
|---|
| Protein accession | YP_003648267 |
|---|
| Protein GI | 296141024 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.416348 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTCGG CAACTGGCAC CATCGGGGCC GCCACACTCA CGCGCCAACT CGGGGCCTGG
CGGCCGGACG GCCGACGTCC GGCATATCTC GCCTTGGCGG AAGCACTGCG CCTACTGGTA
CTCGACGGCC GCGTATCGGT GGGTACGGCC CTGCCCAGCG AACGCGCGCT GGCCGCGCAT
CTGGAAGTCA GCCGCACCAC TGTGACCGCC GCCTACGCCG AGCTGCGCGA CAGCGGACAC
CTGCAGTCAA GACAGGGGGC GCGCAGCGTA CTCACGCTGC CCCACACCGT TCCGGCCGAA
CCCGCAGACA CCGGCTCCGA AGCCGACCTG ATCCGGCTGA ACATCGCGGC ACCGTCGGCC
CCCGACCAGA TCGTGCACGA CGGGTATCGC CACGCCCTCG AATGCGCCCC GCCCTATCTC
GCGGGAATCG GCCTGTACCC CGGCGGGATC CGCGCCCTCC GTGAGTCGAT TGCCCGGCGG
TACACCGACC GCGGGTTGCC GACCGCGGCG GAGCAGGTGC TCGTCACGTC CGGCGCCCAG
CACGCCCTGC GCATCGTGCT CGACACCCTG GTGCACCCCG GCGATCGCGT GCTCATCGAA
CAGCCCACCC ACCACGGCAC GATCTTGGCG ATCCGCCGGC ACAACGCGCG GCCCGTCGCC
GTGGGACTGC ATCCCGCACA CGGATGGGAT CTCGATCAGT TCGAGGCGGT GGTCAAGCAG
CAGAATCCGC GAATCATCTT CTCCATCGCA GACTTTCATA ATCCCACTGG ACTGCTGCTC
GATGCAGCCG GTCGCGCCCG GCTGGCCGAG ATCTCGGCGC GGTATCGAGT GCCACTCGTC
GTCGACGAGA CGATGGCCGA GCTGGGCCTC GACGTCCCCG CTCCCCCACC TCTCGCGGCG
CTCGCCCCAC GCGGCGCGCA GATCATCTCC ATCGGTTCGG CCAGTAAGAC GGTCTGGGCC
GGCCTGCGGG TGGGCTGGAT CCGCACCGAG ACACCTCCCG ACGGACTCAC CTCCGCCCGC
TACGACATGG ACCTCGCAGG CGCGGTGTTC GAGCAACTCG CCGCCGGCTA CGCCCTCGAT
CACCTCGACG ACTTCCTCCC CGCTCGACTC GAATCCCTTC GCCTGGCACG GTCGGTCGCG
CTCGAGGGGG TCGCCGAACA CCTGCCCGGT GCAACGGTCG CCGCCGGCGT CGGCGGACTC
TGCCTGTGGG TCACGTTGCC GCGGCCGGTG GGCACCGCCA CGGCGGCTGC GGCGGCCGGG
CTCGGGGTGC GGATCGCCGC CGGCTCGGCC TTCGGGGTCG ACGGTGCGCT CGAACGCAAC
ATCCGCATTC CGTACACCCT CCCGGTCGGC CAGCTGTCCC GAGCGATCGA CCTCGTCGGC
GCCGCGTACC GCCACGCCAC CGGCGGCGCG GGCGCTACCC CCGACCTGGC CGGCCAGCTG
GTGGTGTAG
|
|---|
| Protein sequence | MFSATGTIGA ATLTRQLGAW RPDGRRPAYL ALAEALRLLV LDGRVSVGTA LPSERALAAH
LEVSRTTVTA AYAELRDSGH LQSRQGARSV LTLPHTVPAE PADTGSEADL IRLNIAAPSA
PDQIVHDGYR HALECAPPYL AGIGLYPGGI RALRESIARR YTDRGLPTAA EQVLVTSGAQ
HALRIVLDTL VHPGDRVLIE QPTHHGTILA IRRHNARPVA VGLHPAHGWD LDQFEAVVKQ
QNPRIIFSIA DFHNPTGLLL DAAGRARLAE ISARYRVPLV VDETMAELGL DVPAPPPLAA
LAPRGAQIIS IGSASKTVWA GLRVGWIRTE TPPDGLTSAR YDMDLAGAVF EQLAAGYALD
HLDDFLPARL ESLRLARSVA LEGVAEHLPG ATVAAGVGGL CLWVTLPRPV GTATAAAAAG
LGVRIAAGSA FGVDGALERN IRIPYTLPVG QLSRAIDLVG AAYRHATGGA GATPDLAGQL
VV
|
|---|
| |