Gene Tpau_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3343 
Symbol 
ID9157517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3443178 
End bp3443837 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content66% 
IMG OID 
Productprotein of unknown function DUF161 
Protein accessionYP_003648266 
Protein GI296141023 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.601494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCATGC TGAGTGTCAT GATGGTGCGA CTGATCAAGC TGTTCGTCGG TTTGTGGCTC 
TACGGGACCG CGATGGCCGC GATCCTGCGT GCGGGCCTGG GCAACATGCC GTGGGATGTT 
CTCCATCAGG GGATCGCCGA CAGAGTCGGC ATCTCTGTGG GCGCCGTGAT CGTGGTGGTG 
GGCGCAGTGG TGCTGTTGGC ATGGATCCCG TTGCGCGAGC GGCCGGGCTT CGGCACCGTC 
GCGAATGTCT TCGTGATCGG TATCGCGTTC GACGTGATGT CACCGTTGTT CCCGTACCGC 
CCGGCATTGG TGATCGCCGT TCCCCTGATG CTGCTCGGCA TCGTCGGCAA CGCTTTCGCG 
ACGGTCCTCT ACATCGGTGC CGAAATGGGC CCCGGCCCCC GCGACGGCCT GATGACCGGC 
CTGGTCCGCA AGACCGGATG GTCGGTACGG GTGGTGCGCA CGTCGATGGA GGTCACGGTG 
GTGGCCATCG GATTCCTGCT CGGCGGAACG CTGGGCGTGG GCACCGTTCT GTACGCGGTC 
GGAGTGGGGC CGCTGATCCA GGTGTTCGCT CGCACCGGAC TCGGTGGCCC ACAGCTCGCG 
CGCCCCGCCG ATAAGGTGGA GCAATGCGCA TCCTCATCAC CGGAGCCAGC TCGGGGCTAG
 
Protein sequence
MVMLSVMMVR LIKLFVGLWL YGTAMAAILR AGLGNMPWDV LHQGIADRVG ISVGAVIVVV 
GAVVLLAWIP LRERPGFGTV ANVFVIGIAF DVMSPLFPYR PALVIAVPLM LLGIVGNAFA 
TVLYIGAEMG PGPRDGLMTG LVRKTGWSVR VVRTSMEVTV VAIGFLLGGT LGVGTVLYAV 
GVGPLIQVFA RTGLGGPQLA RPADKVEQCA SSSPEPARG