Gene Tpau_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3342 
Symbol 
ID9157516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3442477 
End bp3443214 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content69% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003648265 
Protein GI296141022 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.468783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCC TCATCACCGG AGCCAGCTCG GGGCTAGGCG AAGGCATGGC CCGCACCTAC 
GCCGAACGCG GCGAGGACGT GGGCCTACTG GCTCGCCGAC TCGACCGGCT CGAGGCCCTC 
AAGGCCGAGA TCTCGGCGGT GCCGGGCTCC GGCGCCGTCG AGGTCGGCGC GCTCGACGTC 
ACCGACTTCG GTGCCGTGCC CGGCGCGATC ACCGAGGTGG TGGGCCGGAT GGGCGGCCTC 
GACCGCGCCA TCATCAACGC AGGCATCGGG AAGGGGGCGC CGCTCGGCAC CGGCAAGCCG 
CACGCCAACC TGGAGACCAT CCAGACGAAC CTCACGGGCG CGGTGGCCCA GATCGAGGCG 
GTGCTGGAGA TCTTCCGTGC CCAGGGACGC GGGCACCTGG TGCTGATCAG TTCCATCGCC 
GGGCAGCGCG GAATGCCGAA GGCGCAGACC GCCTATTCCG CGAGTAAGGC CGGACTCACC 
GCTATCGGTG AGGGCCTCCA GGCCGAGTTC GCGGGCAGTG ACATCACAGT GACCGTCATC 
AAGCCGGGCT TCATCGAGAC TGACATCAAC AAGGGCGTGA AGACCTCGAT GAAGTCCTCC 
CTGGGCGATG GTGTGAAGGC ACTCGTCAAG GCCATCGACC GTGAGCCTAA GGAAGCCGCC 
GTCCCCAGCT GGCCATGGGC GCCGCTAGGC GCCGTGCTTC GGCACGCGCC CGATGAACTG 
ACGCGCCGCC TGATCTGA
 
Protein sequence
MRILITGASS GLGEGMARTY AERGEDVGLL ARRLDRLEAL KAEISAVPGS GAVEVGALDV 
TDFGAVPGAI TEVVGRMGGL DRAIINAGIG KGAPLGTGKP HANLETIQTN LTGAVAQIEA 
VLEIFRAQGR GHLVLISSIA GQRGMPKAQT AYSASKAGLT AIGEGLQAEF AGSDITVTVI 
KPGFIETDIN KGVKTSMKSS LGDGVKALVK AIDREPKEAA VPSWPWAPLG AVLRHAPDEL 
TRRLI