Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3295 |
Symbol | |
ID | 9157469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3387254 |
End bp | 3388183 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | Auxin Efflux Carrier |
Protein accession | YP_003648219 |
Protein GI | 296140976 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCTCCG TACTCGCCGG CTTCGCCGTG ATCGCGATCA TCGTCGCGGC GGGGTGGATA CTCGGCCGGC TCGGAGTACT CGGAGAGCAG CCCGAGCGCC AACTCTCCCT GCTCGTGTTC TACCTGCTCA CTCCCGCTCT GTTGCTGCAC GCGCTGGCCA CCACCGACGT CGCGGTGCTG TTCAGTTCGC GGCTCGCGGT GAGTGCGGCA TCGGCGCTGG CGATCGCGGC CGTCTACTAC GTGTTCGTCC GGGTCTTCTG GCGCCGCACC ATGGGAGACG CCACGATCGG CGCGCTGGCG TCGAGCTACG TGAACTCGTC GAATCTCGGC ATCCCCATCG CGGTCTTCGT GCTCAAGGAC ACCTCGTACG TCGCACCGCT GCTGCTCTTC CAGATCCTCA TCTTCTCGAC GATCGCGCTC ACCATGCTCG ATCTGTCGGA GCGGCGAGGC GCTCGTCAAC CGGTGTGGCG CACGGTGGCC ACCCCGCTGC TGAACCCGAT CGTCGCCGGC GCTCTGATCG GGCTGGTCAT CTCGCTCACC CGCTGGCATC CACCACAGTG GCTGATGAGC CCGGTCAAGC TGATGGGCGA TGCTTCCGTG CCGATGGCGC TCATCGTGTT CGGCCTCTCC CTCGGCGGTG TCACCGTGAT GCAGAAGGGT CAGGCTCCAC GCCGGGACAT CGTGCTGGCC TCCGCGCTCA AGATGATCGC AATGCCGGTG CTGGCCTGTG CGATGGCGCG GTACGCCTTC GGGCAGACCG GCCACGCCCT GTTCGCGCAA ACCGTGACGG CGACCCTCCC TACCGCGCAG AACGTGCTGG TCTACGGGTT GCGCTATAAC CGGGGCGTGA TCCTGGCCCG CGACACCGGG CTTATCACGA CGGCACTGTC CATCCCGGCG ATCATGCTGA TCGCGGTGCT TCTCACCTGA
|
Protein sequence | MTSVLAGFAV IAIIVAAGWI LGRLGVLGEQ PERQLSLLVF YLLTPALLLH ALATTDVAVL FSSRLAVSAA SALAIAAVYY VFVRVFWRRT MGDATIGALA SSYVNSSNLG IPIAVFVLKD TSYVAPLLLF QILIFSTIAL TMLDLSERRG ARQPVWRTVA TPLLNPIVAG ALIGLVISLT RWHPPQWLMS PVKLMGDASV PMALIVFGLS LGGVTVMQKG QAPRRDIVLA SALKMIAMPV LACAMARYAF GQTGHALFAQ TVTATLPTAQ NVLVYGLRYN RGVILARDTG LITTALSIPA IMLIAVLLT
|
| |