Gene Tpau_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3295 
Symbol 
ID9157469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3387254 
End bp3388183 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content66% 
IMG OID 
ProductAuxin Efflux Carrier 
Protein accessionYP_003648219 
Protein GI296140976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCCG TACTCGCCGG CTTCGCCGTG ATCGCGATCA TCGTCGCGGC GGGGTGGATA 
CTCGGCCGGC TCGGAGTACT CGGAGAGCAG CCCGAGCGCC AACTCTCCCT GCTCGTGTTC
TACCTGCTCA CTCCCGCTCT GTTGCTGCAC GCGCTGGCCA CCACCGACGT CGCGGTGCTG
TTCAGTTCGC GGCTCGCGGT GAGTGCGGCA TCGGCGCTGG CGATCGCGGC CGTCTACTAC
GTGTTCGTCC GGGTCTTCTG GCGCCGCACC ATGGGAGACG CCACGATCGG CGCGCTGGCG
TCGAGCTACG TGAACTCGTC GAATCTCGGC ATCCCCATCG CGGTCTTCGT GCTCAAGGAC
ACCTCGTACG TCGCACCGCT GCTGCTCTTC CAGATCCTCA TCTTCTCGAC GATCGCGCTC
ACCATGCTCG ATCTGTCGGA GCGGCGAGGC GCTCGTCAAC CGGTGTGGCG CACGGTGGCC
ACCCCGCTGC TGAACCCGAT CGTCGCCGGC GCTCTGATCG GGCTGGTCAT CTCGCTCACC
CGCTGGCATC CACCACAGTG GCTGATGAGC CCGGTCAAGC TGATGGGCGA TGCTTCCGTG
CCGATGGCGC TCATCGTGTT CGGCCTCTCC CTCGGCGGTG TCACCGTGAT GCAGAAGGGT
CAGGCTCCAC GCCGGGACAT CGTGCTGGCC TCCGCGCTCA AGATGATCGC AATGCCGGTG
CTGGCCTGTG CGATGGCGCG GTACGCCTTC GGGCAGACCG GCCACGCCCT GTTCGCGCAA
ACCGTGACGG CGACCCTCCC TACCGCGCAG AACGTGCTGG TCTACGGGTT GCGCTATAAC
CGGGGCGTGA TCCTGGCCCG CGACACCGGG CTTATCACGA CGGCACTGTC CATCCCGGCG
ATCATGCTGA TCGCGGTGCT TCTCACCTGA
 
Protein sequence
MTSVLAGFAV IAIIVAAGWI LGRLGVLGEQ PERQLSLLVF YLLTPALLLH ALATTDVAVL 
FSSRLAVSAA SALAIAAVYY VFVRVFWRRT MGDATIGALA SSYVNSSNLG IPIAVFVLKD
TSYVAPLLLF QILIFSTIAL TMLDLSERRG ARQPVWRTVA TPLLNPIVAG ALIGLVISLT
RWHPPQWLMS PVKLMGDASV PMALIVFGLS LGGVTVMQKG QAPRRDIVLA SALKMIAMPV
LACAMARYAF GQTGHALFAQ TVTATLPTAQ NVLVYGLRYN RGVILARDTG LITTALSIPA
IMLIAVLLT