| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3277 |
|---|
| Symbol | |
|---|
| ID | 9157451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3375078 |
|---|
| End bp | 3375524 |
|---|
| Gene Length | 447 bp |
|---|
| Protein Length | 148 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | large conductance mechanosensitive channel protein |
|---|
| Protein accession | YP_003648201 |
|---|
| Protein GI | 296140958 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.422663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGG GCTTCAAAGA CTTTCTTCTC AAAGGGAACG TGCTCGATCT CGCGGTCGCC
GTGGTCGTCG GTGCCGCGTT CACCGCGATC GTCACCGCGT TCACCGACCA CATCGTGCAG
CCGCTCATCG CGTCGATCGG TGGCGGCAAG GACGTGCAGG GCCTCGCCTG GCAGATCCGA
CCGGGCGTCC CCGCCACCAC CGTGGACCTT GGCGCCGTCA TCACCGCCGG CATCAACTTC
ATCCTGGTGG CCGCAGTCGT GTACTTCGTT CTGATCCTGC CGTACGAGAC GCTGAAGAAC
CGCGCCGGTA CGGCCGCCAC AGAGGACGAG GTGGACGTGC TGGTGGAGAT CCGCGACCTC
CTGGCCTCGC AGGCCGGTAC CCCCCAGGGC GGTGCCCACG CCGCGCTGCC GCCCACGGGC
CAGTTCCCGA CGCAGCCGAA GCAGTAG
|
|---|
| Protein sequence | MLKGFKDFLL KGNVLDLAVA VVVGAAFTAI VTAFTDHIVQ PLIASIGGGK DVQGLAWQIR
PGVPATTVDL GAVITAGINF ILVAAVVYFV LILPYETLKN RAGTAATEDE VDVLVEIRDL
LASQAGTPQG GAHAALPPTG QFPTQPKQ
|
|---|
| |