Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3271 |
Symbol | |
ID | 9157445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3370958 |
End bp | 3371563 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003648195 |
Protein GI | 296140952 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.377871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACCGAT ACGATACCGG TATGACGGTT TCCCCGGCTG CGCACGTCGG CGCCCAGCGA ACCCCGTCGC CGGCGCGACG GATCGTGGAC GCCGCGCGCG AGGTGATCGC GGCGAACGGC ATCCCGGGCG TGAGCATGGA TCAGGTCGCC AAACAGGCGC ACGTCTCCCG CAGCACGCTC TATCGGATCT TTCCCAATCG CGATCAGCTG ATCGCCCGCG TGGTGGCGAT CGAGATCCGT ACGCTGCGCC GCCGGCTCGA CAAGACGATC GTCGGATACA CGCCGCAGCA GACGCTGGTC GAGGTCTTCG TACTGAGCAT CGAGCAGGCG GCGGCCAATC TCGCGGTGTC GAAGGTGCTG GCCGCGGAGC CCGAATACTT CCTGCGCATC CCTCGCGGTG TCTGGGACTT GTTGATCCAG GGCATCGTGA TCCGGCTGCG CAATTCGGGT GCGGAGCAGG ATTACGCCGA GCTGTGCTCG GTCACCGACC TGATGCTGCG CGTGACCGGG TCGCTGCTAT CGAACCCGCC CACCGGCCTC GACGTCGCCG ATTCCGCCGC ACTGCGGGCC TACGGCGAGC GCTATATCGC CCGCCTGTTG ATCTAG
|
Protein sequence | MNRYDTGMTV SPAAHVGAQR TPSPARRIVD AAREVIAANG IPGVSMDQVA KQAHVSRSTL YRIFPNRDQL IARVVAIEIR TLRRRLDKTI VGYTPQQTLV EVFVLSIEQA AANLAVSKVL AAEPEYFLRI PRGVWDLLIQ GIVIRLRNSG AEQDYAELCS VTDLMLRVTG SLLSNPPTGL DVADSAALRA YGERYIARLL I
|
| |