Gene Tpau_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3271 
Symbol 
ID9157445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3370958 
End bp3371563 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003648195 
Protein GI296140952 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.377871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCGAT ACGATACCGG TATGACGGTT TCCCCGGCTG CGCACGTCGG CGCCCAGCGA 
ACCCCGTCGC CGGCGCGACG GATCGTGGAC GCCGCGCGCG AGGTGATCGC GGCGAACGGC
ATCCCGGGCG TGAGCATGGA TCAGGTCGCC AAACAGGCGC ACGTCTCCCG CAGCACGCTC
TATCGGATCT TTCCCAATCG CGATCAGCTG ATCGCCCGCG TGGTGGCGAT CGAGATCCGT
ACGCTGCGCC GCCGGCTCGA CAAGACGATC GTCGGATACA CGCCGCAGCA GACGCTGGTC
GAGGTCTTCG TACTGAGCAT CGAGCAGGCG GCGGCCAATC TCGCGGTGTC GAAGGTGCTG
GCCGCGGAGC CCGAATACTT CCTGCGCATC CCTCGCGGTG TCTGGGACTT GTTGATCCAG
GGCATCGTGA TCCGGCTGCG CAATTCGGGT GCGGAGCAGG ATTACGCCGA GCTGTGCTCG
GTCACCGACC TGATGCTGCG CGTGACCGGG TCGCTGCTAT CGAACCCGCC CACCGGCCTC
GACGTCGCCG ATTCCGCCGC ACTGCGGGCC TACGGCGAGC GCTATATCGC CCGCCTGTTG
ATCTAG
 
Protein sequence
MNRYDTGMTV SPAAHVGAQR TPSPARRIVD AAREVIAANG IPGVSMDQVA KQAHVSRSTL 
YRIFPNRDQL IARVVAIEIR TLRRRLDKTI VGYTPQQTLV EVFVLSIEQA AANLAVSKVL
AAEPEYFLRI PRGVWDLLIQ GIVIRLRNSG AEQDYAELCS VTDLMLRVTG SLLSNPPTGL
DVADSAALRA YGERYIARLL I