Gene Tpau_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3261 
Symbol 
ID9157434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3362651 
End bp3363292 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content71% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase family protein 
Protein accessionYP_003648185 
Protein GI296140942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGTCG TCGTCTTCGG AGCGTCGGGT TACTCCGGCG CCAACATCAC CGCTGATCTG 
GTCTCCCGTG GTATCGACAC CGTCGGCGTC GCGCGGTCGA TCGACAAGGT TCCGGCCGGC 
GCCACCGCCG CCTCGGGCGA TGTCACCGAC GCCGATTTCG TTGCGGACGC CACCACCGGC 
GCCGACGTGA TCGTCTCCGC GCTGCCCACT GCGGCACCGG CGGGTGAGGG CGTCGACCTG 
CCGACCTCGC TGGTCGGCCT CGTCGCGGCC GCCCGCGCGG CCGGTGCCCG GCTCGGGGTG 
GTCGGCGGCG CCGGGAGCCT CCTGGTGGCC GACGGTGGTC CCAAACTGGT CGAGACGCCC 
GGCTTCCCCG AGGCCGTGAA GCCGATCGCG CTCGAGCACG ATCGCGCGCT CGACTATCTG 
CGCACCGTCG ACGATGTGGA CTGGTTCTAC CTGAGCCCGG CCGCGAGCTA CGGCTCGTTC 
AACCCCGGCA CCAAGCGCGG AACCTACCGC ACCAGCGGCG ACCTGCTGCT CAGTGATCCC 
GAGGGCAACT CCGAGATCTC CGGCGAGGAC TACGCCACCG CATTCGTCGA CGAGATCGTG 
ACCCCCGCGC ACCACCGCGA GCGGTTCTCC GTCGCGTACT GA
 
Protein sequence
MKVVVFGASG YSGANITADL VSRGIDTVGV ARSIDKVPAG ATAASGDVTD ADFVADATTG 
ADVIVSALPT AAPAGEGVDL PTSLVGLVAA ARAAGARLGV VGGAGSLLVA DGGPKLVETP 
GFPEAVKPIA LEHDRALDYL RTVDDVDWFY LSPAASYGSF NPGTKRGTYR TSGDLLLSDP 
EGNSEISGED YATAFVDEIV TPAHHRERFS VAY