Gene Tpau_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3231 
Symbol 
ID9157404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3331565 
End bp3332470 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content72% 
IMG OID 
Product4-diphosphocytidyl-2C-methyl-D-erythritolkinase 
Protein accessionYP_003648155 
Protein GI296140912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTACCCC CGTCGCTCAC CGTTCGCGCG CCCGCGAAGG TGAACCTGCA TCTCGGCGTC 
GGCGATGTGC GCCCCGACGG TTTCCACGAG TTGCAGACCG TCTTCCAGGC GTTGTCCCTG
CACGACGAGG TGTCCCTCGC GCGCGCCGAC GAGCTCAGTC TGCACGTGTC CGGAGAGGGC
GCGCGCGATG TGCCCACCGA CTCCACCAAT CTCGCCGCCC GCGCGGTCGC CGCGCTCGCC
GAGCGGTACG GACTCGACCC GGCGGTGCGG ATCGAGATCG CCAAGGGGAT TCCGGTCGCG
GGTGGGATGG CCGGCGGTTC GGCGGATGCG GCGGCTGCGC TCCTCGGCGC AGCCACCCTG
TGGCACCTCG ACCTGTCCCG TTCCGAACTC GATGAGATCG CCGCGACACT CGGCTCCGAT
GTGCCGTTCT CGCTGCACGG CGGTACCGCA CTGGGAACAG GTCGCGGCGA GCAACTGATT
CCGGCGTTGT CCCGCGGGGA GTTCCACTGG ACCTTGGCGC TGGCCCGCGA GGGTCTGAGC
ACCCCGGCGG TCTATCGCGA ACTGGACCGG CTGCGCGAAG CCGGCGACCC GCCTCGCGCC
GGCAGCCCCG ACGATCTGCT CGCGGCCGTC GCCTCGGGCG ATCCGAACCG GCTCGCGCCG
TTGCTCGCCA ACGATCTGCA GGCCGCCGCG CTCTCGCTGC AACCGGGCCT GCGCCGCACC
CTGCGCGCGG GGATGGAGGC CGGGGCGCTC GCCGGTATCG TCTCCGGCAG TGGCCCGACG
TGCGCCTTCC TGTGCATCAA CGGTGAATCC GCCGTCGAGG TCGGCTCGGA GTTGGCCGGT
GCGGGCGTCT GCCGGACGGT GCGCGTCGCC TCGGGTCCGG TGCCCGGCGC CGAAGTGCTG
CGCTGA
 
Protein sequence
MVPPSLTVRA PAKVNLHLGV GDVRPDGFHE LQTVFQALSL HDEVSLARAD ELSLHVSGEG 
ARDVPTDSTN LAARAVAALA ERYGLDPAVR IEIAKGIPVA GGMAGGSADA AAALLGAATL
WHLDLSRSEL DEIAATLGSD VPFSLHGGTA LGTGRGEQLI PALSRGEFHW TLALAREGLS
TPAVYRELDR LREAGDPPRA GSPDDLLAAV ASGDPNRLAP LLANDLQAAA LSLQPGLRRT
LRAGMEAGAL AGIVSGSGPT CAFLCINGES AVEVGSELAG AGVCRTVRVA SGPVPGAEVL
R