Gene Tpau_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3136 
Symbol 
ID9157307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3245340 
End bp3246125 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003648062 
Protein GI296140819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.257722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA CCGAACGGGT CGAGCTGACC GGTGTGGGCA AGACCTACGA CACCGCCAGC 
GGCAAGACCG TCGCCCTGCA GCCCACCGAT CTGACGATCG AACCGGGCGA GTTCGTGTCC
ATCGTCGGCC CGTCGGGGTG CGGTAAGACC ACCCTGCTGC GGCTCATCGC AGGTTTCGAG
GACCCCACCG CGGGCATCGT CGAGGTGGGC GGGTCGAAGG TCACCGCACC GTCGGCCGAC
CGCGGAGTGG TCTTTCAGGC CCCCACCCTG TACCCGTGGC TCACGGTGCG CGGCAACGTC
GAGTTCGGGC CCAAGGTGAG CGGAGTCGGC AAGACCGAGC GCCGGGAGCA GGCGCAGAAG
CTGCTGGATC TGGTGGGGCT CGGCGACTTC GGAGACAAGC GCCCGTACGA GTTGTCCGGC
GGCATGCAGC AGCGGGCGCA GATCGCCCGG GTGCTGGTCA ACGATCCTGC GATCGTGCTG
ATGGACGAGC CGTACGGCGC GCTCGACGCG CTCACCCGCG AGCGGCTGCA GGTGGACCTG
CTCAAGATCT GGCGGGGCGC CGGAAAGACC ATCGTCTTCA TCACGCACTC CGTCGACGAA
GCAGTCTTCC TGAGTACCCG GGTCCTGGTG ATGAGTGCCC GGCCCGGCCG CGTCGTCATC
GACCGGAAGG TGGAGCTGCC GGGGGACGGG CCGGATGTGG TGCGTGATCC GTCCGTGACC
GGTACGCCCG AATTCCAGGC CCTGCGCACC GAGCTGGCCG CGGCCATCTA CGCCGCGCAC
GACTGA
 
Protein sequence
MSETERVELT GVGKTYDTAS GKTVALQPTD LTIEPGEFVS IVGPSGCGKT TLLRLIAGFE 
DPTAGIVEVG GSKVTAPSAD RGVVFQAPTL YPWLTVRGNV EFGPKVSGVG KTERREQAQK
LLDLVGLGDF GDKRPYELSG GMQQRAQIAR VLVNDPAIVL MDEPYGALDA LTRERLQVDL
LKIWRGAGKT IVFITHSVDE AVFLSTRVLV MSARPGRVVI DRKVELPGDG PDVVRDPSVT
GTPEFQALRT ELAAAIYAAH D