Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3136 |
Symbol | |
ID | 9157307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3245340 |
End bp | 3246125 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003648062 |
Protein GI | 296140819 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.257722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAGA CCGAACGGGT CGAGCTGACC GGTGTGGGCA AGACCTACGA CACCGCCAGC GGCAAGACCG TCGCCCTGCA GCCCACCGAT CTGACGATCG AACCGGGCGA GTTCGTGTCC ATCGTCGGCC CGTCGGGGTG CGGTAAGACC ACCCTGCTGC GGCTCATCGC AGGTTTCGAG GACCCCACCG CGGGCATCGT CGAGGTGGGC GGGTCGAAGG TCACCGCACC GTCGGCCGAC CGCGGAGTGG TCTTTCAGGC CCCCACCCTG TACCCGTGGC TCACGGTGCG CGGCAACGTC GAGTTCGGGC CCAAGGTGAG CGGAGTCGGC AAGACCGAGC GCCGGGAGCA GGCGCAGAAG CTGCTGGATC TGGTGGGGCT CGGCGACTTC GGAGACAAGC GCCCGTACGA GTTGTCCGGC GGCATGCAGC AGCGGGCGCA GATCGCCCGG GTGCTGGTCA ACGATCCTGC GATCGTGCTG ATGGACGAGC CGTACGGCGC GCTCGACGCG CTCACCCGCG AGCGGCTGCA GGTGGACCTG CTCAAGATCT GGCGGGGCGC CGGAAAGACC ATCGTCTTCA TCACGCACTC CGTCGACGAA GCAGTCTTCC TGAGTACCCG GGTCCTGGTG ATGAGTGCCC GGCCCGGCCG CGTCGTCATC GACCGGAAGG TGGAGCTGCC GGGGGACGGG CCGGATGTGG TGCGTGATCC GTCCGTGACC GGTACGCCCG AATTCCAGGC CCTGCGCACC GAGCTGGCCG CGGCCATCTA CGCCGCGCAC GACTGA
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Protein sequence | MSETERVELT GVGKTYDTAS GKTVALQPTD LTIEPGEFVS IVGPSGCGKT TLLRLIAGFE DPTAGIVEVG GSKVTAPSAD RGVVFQAPTL YPWLTVRGNV EFGPKVSGVG KTERREQAQK LLDLVGLGDF GDKRPYELSG GMQQRAQIAR VLVNDPAIVL MDEPYGALDA LTRERLQVDL LKIWRGAGKT IVFITHSVDE AVFLSTRVLV MSARPGRVVI DRKVELPGDG PDVVRDPSVT GTPEFQALRT ELAAAIYAAH D
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