Gene Tpau_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3122 
Symbol 
ID9157293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3231240 
End bp3231896 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648048 
Protein GI296140805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000156322 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACGCGC ATACTCGTAA GACCATCGCC AAGATCCTGT CCAACCCCGC TCCGCGCCAG 
CTCAAGTGGA AGGACTTCGT CCAGGTGTGG GACGACGTCG CCGACAGCGT GGAGTACGAG 
AAGGGCGATC GGCTGGTGGT CCACATCAAC AACGAGCGCG TGGTGCTCCA CCGTCCCCAC 
AACGACGTCG TGCCCATCGA CGACATCGAG CGCGCCCGGC CGCTGCTGCG CGCCACCCAG 
GAGACCTCGG ACGCGGGAAC ACTCCTGGTG GTGGCGATCG ACACCAAGCG GGCGCGACTG 
ATCGACTACG ACCTCGATTC CGCGCGCACC TCCACGCAGG AGAAGGACCT ACGCAACAGC 
GATCCACGTG CCCGCCGGAT GCGCGCGGTC GAACGCAAGA CCGGTAACGA CGACGAGCAG 
GTGCTGGTGA CCTACTTCGA CAAGATCGCC GCGACTCTCG CCGAGGACGA GCAGTCGTTC 
GTGGTGCTCG GGCACGGCGG CGGAAAGTCG GACATCGGCG CGGAGTTCAT CGCGCGGTTG 
CGCAGCCACC ACCCCCAGGT GGCCGAGCGC CTCGCCGGGT CGGGCTACAT CGACCTCAGT 
GCCGCCACCG ACACCGATAT CGAGAAGAAG GCCATCGAGG TCCTGCACGG CGAGTAG
 
Protein sequence
MNAHTRKTIA KILSNPAPRQ LKWKDFVQVW DDVADSVEYE KGDRLVVHIN NERVVLHRPH 
NDVVPIDDIE RARPLLRATQ ETSDAGTLLV VAIDTKRARL IDYDLDSART STQEKDLRNS 
DPRARRMRAV ERKTGNDDEQ VLVTYFDKIA ATLAEDEQSF VVLGHGGGKS DIGAEFIARL 
RSHHPQVAER LAGSGYIDLS AATDTDIEKK AIEVLHGE