| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3116 |
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| Symbol | |
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| ID | 9157287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 3225833 |
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| End bp | 3227110 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | exodeoxyribonuclease VII, large subunit |
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| Protein accession | YP_003648042 |
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| Protein GI | 296140799 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.149038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACTC CCGCTTCGCC GAGCGGCGGC GCTTCGACCG CGGAGTCGCC CTGGCCCGTC
CGCGTGGTCT CGATGAAAGT CGCCCAGTGG ATCGACCGCC TCGGCGAGGT CTGGGTGGAG
GGCCAGATCA CCCAGCTCAA CCGACGCGGC GGCGGCACCG CGTTCCTGGT GCTGCGCGAC
CCATCGGCGA ACGTCTCGCT TCAAGTCACA TGCCTGCCTG CGGTGCTCGA CCGCTCCGAG
GTACCGCTCA CCGAGGGCAC CCAGGTGATC GTGCGCGGCA AGTTCACGTA CTGGACCGGC
CGGGGCACAT TGTCGCTGCG GATCACCGAG ATCCGTGCGG TGGGCGTGGG CGAGCTGCTC
GCCCGCATCG AGCGGCTCCG GCAACTGCTG CACGCGGAGG GCCTGTTCGA CCCGCGACTC
AAGCGGCCCC TGCCCTTCCT GCCGCGCACC GTCGGGCTGG TGACGGCACG GGCGAGCGCC
GCCGAGCGCG ACGTCCGGTC CATCGCCGAG GACCGGTGGC CCGATGTGAA GATCCGCGCC
GAGTACTCCA CCGTGCAGGG CCCGACCGCG GTACCCCAGT TGGTGACGGC GCTGCGCACC
CTGGACGCCG ACCCCGATGT GGACGTGATC ATCCTGGCGC GTGGCGGAGG CAGCGTCGAG
GACCTGCTGC CCTTCTCGGA CGAAGCGCTG TGCCGCGCCG TGCACGCGGC GCGCACGCCG
ATCGTCTCGG CGATCGGACA CGAGCCCGAC AACCCGCTGT GCGACTTCGC CGCCGACGTG
CGGGCGGCGA CCCCCACCGA TGCCGCCAAA CGGGTGGTGC CCGATGTGCT CGCCGAGCGC
GACCGGGTCG CCGAACTGCG CGATCGCGCC GCTGCGGCAC TGCGCGGCTG GGTCTCCCGT
GAGGTGCGAG CGCTGGAATC GCTGCGCTCG CGGCCGGTAT TCGCGCATCC GTACCGGCTC
ATCGACGATC GCGCCGACGA TATCGACCGG TTGCGGCGCG ATGGTCGGCG GGACGTGCGC
AGGCTGCTCG ACCGGGAGGC CGACGGGGTG CGCCACCTGG CTGCCCGGCT CACCGCGCTG
GGACCGGCGG CGACCATGGC CCGTGGCTAC GCGGTGGTAC AGAAGGTGAC CCCCGACGGC
GAGAACCCGG TGGTACGCGG CATCGACGAG ATCGCGCCCG GCACCCAGCT GCGGGTCCGT
CTGCCCGACG GTGCCGCGCG GGCGGCCGTG ATGGGTGTGG AAAGACTGGC GACGACGACC
GAGGAGACGG ACGAGTGA
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| Protein sequence | MTTPASPSGG ASTAESPWPV RVVSMKVAQW IDRLGEVWVE GQITQLNRRG GGTAFLVLRD
PSANVSLQVT CLPAVLDRSE VPLTEGTQVI VRGKFTYWTG RGTLSLRITE IRAVGVGELL
ARIERLRQLL HAEGLFDPRL KRPLPFLPRT VGLVTARASA AERDVRSIAE DRWPDVKIRA
EYSTVQGPTA VPQLVTALRT LDADPDVDVI ILARGGGSVE DLLPFSDEAL CRAVHAARTP
IVSAIGHEPD NPLCDFAADV RAATPTDAAK RVVPDVLAER DRVAELRDRA AAALRGWVSR
EVRALESLRS RPVFAHPYRL IDDRADDIDR LRRDGRRDVR RLLDREADGV RHLAARLTAL
GPAATMARGY AVVQKVTPDG ENPVVRGIDE IAPGTQLRVR LPDGAARAAV MGVERLATTT
EETDE
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