Gene Tpau_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3088 
Symbol 
ID9157259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3201407 
End bp3201841 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003648019 
Protein GI296140776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00891754 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGAAC ATGAGGAGAC CTGCGACTTC GGGTGGTCGC TCGGAGTGCT CAATAAGGCG 
TACGCCGACG AGGTGGCGCC GATCCTGGAA CGGCTGCCCC GCGGGGTGCG CGGCTATCAG
ACGCTGTACG CGGCGGCGAC CTACGATCTG CCGACGCAGT TGGCGCTCGC CGAATACCTG
ATGATCGACA AATCCGTCAT GCCCTACGTG GTGGACGATC TCGTGGCCGC CGGACTGGTG
ACCCGCGAGC CCTCACCGAC CGATCGTCGG ACGCGGCGTG TGGTGCCCAC GGCAGCAGGC
CTCGCTGCGT TGTCCGATGT GAGCGCGGCC GTGGGGGCGG CCGAGGCGCG ACTGCTGGGT
CCGCTCTCCC CCGATGACGC CCAGGCCTTG CGGCGCGCCG TGGCGATCGT CGCGCGCACC
TCCCGTGACG GTTAG
 
Protein sequence
MAEHEETCDF GWSLGVLNKA YADEVAPILE RLPRGVRGYQ TLYAAATYDL PTQLALAEYL 
MIDKSVMPYV VDDLVAAGLV TREPSPTDRR TRRVVPTAAG LAALSDVSAA VGAAEARLLG
PLSPDDAQAL RRAVAIVART SRDG