| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3088 |
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| Symbol | |
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| ID | 9157259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 3201407 |
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| End bp | 3201841 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | transcriptional regulator, MarR family |
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| Protein accession | YP_003648019 |
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| Protein GI | 296140776 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00891754 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCGGAAC ATGAGGAGAC CTGCGACTTC GGGTGGTCGC TCGGAGTGCT CAATAAGGCG
TACGCCGACG AGGTGGCGCC GATCCTGGAA CGGCTGCCCC GCGGGGTGCG CGGCTATCAG
ACGCTGTACG CGGCGGCGAC CTACGATCTG CCGACGCAGT TGGCGCTCGC CGAATACCTG
ATGATCGACA AATCCGTCAT GCCCTACGTG GTGGACGATC TCGTGGCCGC CGGACTGGTG
ACCCGCGAGC CCTCACCGAC CGATCGTCGG ACGCGGCGTG TGGTGCCCAC GGCAGCAGGC
CTCGCTGCGT TGTCCGATGT GAGCGCGGCC GTGGGGGCGG CCGAGGCGCG ACTGCTGGGT
CCGCTCTCCC CCGATGACGC CCAGGCCTTG CGGCGCGCCG TGGCGATCGT CGCGCGCACC
TCCCGTGACG GTTAG
|
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| Protein sequence | MAEHEETCDF GWSLGVLNKA YADEVAPILE RLPRGVRGYQ TLYAAATYDL PTQLALAEYL
MIDKSVMPYV VDDLVAAGLV TREPSPTDRR TRRVVPTAAG LAALSDVSAA VGAAEARLLG
PLSPDDAQAL RRAVAIVART SRDG
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