Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3058 |
Symbol | |
ID | 9157229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3170094 |
End bp | 3170861 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Abortive infection protein |
Protein accession | YP_003647990 |
Protein GI | 296140747 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.112534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCGGG TGAGTTCAGC AGCCCAGCCC GCCGTCCCCG AACAGTCCGC TCTGCGTGCG GCCGTTTCCG GGGTCCGCGC CTACGTCGAC ATCGCGGTCG TCGTCGGCGT ACTCGTGGCC ACCAACCTGG TGGCGCACTT CACGGGCAGC TGGGCCGCGC TGCTGGCCGT CCCGATCTCG GCGGCGGTGC TGCTGGGCAT CGCTCGCTAC CGCGGCCTGG ACTGGCACGA GCTGGGGCTG GGCCGCGAGC ACTGGCGTTC CGGCGCGAAG TACGCCGCCG CGGCGGTGTT CATCGTCGCC ACCGTGATCA TCGTGGGCGC GCTGCTCCCG GTGACCCGCG GCTTGTTCCT CAACGACCGC TACGCGACGT TCTCCACGGC GATCATCGCG TCGATGGTGA TCATCCCGCT GCAGACGGTG ATCCCCGAGG AGATCGCCTT CCGCGGCGCA CTGCACGGCA CGCTGTCGCG GGCGATGAAG TTCCGCTGGG TGGTGGTGAC CGGTTCGCTG CTCTTCGGGT TCTGGCACAT CGCCTCGTCA CTCGGTCTCA CCGCCGGCAA CGCCGGGCTC ACCAAGATCC TCGGCAGCGG CCCCCTGGCA CAGATCGCGG GAATCGCCGG AGCGGTGCTC GCGACCGCGC TCGCCGGTTA CGTCTTCACC TGGCTGCGCA CCCGCAGCGG CTCTCTCATC GCGCCCATCG CGCTGCACTG GTGCCTCAAC GGCGCCGGCG CGCTGGCCGC CGCCTTCGCC TGGCAGCTCC TGCGCTGA
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Protein sequence | MERVSSAAQP AVPEQSALRA AVSGVRAYVD IAVVVGVLVA TNLVAHFTGS WAALLAVPIS AAVLLGIARY RGLDWHELGL GREHWRSGAK YAAAAVFIVA TVIIVGALLP VTRGLFLNDR YATFSTAIIA SMVIIPLQTV IPEEIAFRGA LHGTLSRAMK FRWVVVTGSL LFGFWHIASS LGLTAGNAGL TKILGSGPLA QIAGIAGAVL ATALAGYVFT WLRTRSGSLI APIALHWCLN GAGALAAAFA WQLLR
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