Gene Tpau_3058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3058 
Symbol 
ID9157229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3170094 
End bp3170861 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content71% 
IMG OID 
ProductAbortive infection protein 
Protein accessionYP_003647990 
Protein GI296140747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.112534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGGG TGAGTTCAGC AGCCCAGCCC GCCGTCCCCG AACAGTCCGC TCTGCGTGCG 
GCCGTTTCCG GGGTCCGCGC CTACGTCGAC ATCGCGGTCG TCGTCGGCGT ACTCGTGGCC
ACCAACCTGG TGGCGCACTT CACGGGCAGC TGGGCCGCGC TGCTGGCCGT CCCGATCTCG
GCGGCGGTGC TGCTGGGCAT CGCTCGCTAC CGCGGCCTGG ACTGGCACGA GCTGGGGCTG
GGCCGCGAGC ACTGGCGTTC CGGCGCGAAG TACGCCGCCG CGGCGGTGTT CATCGTCGCC
ACCGTGATCA TCGTGGGCGC GCTGCTCCCG GTGACCCGCG GCTTGTTCCT CAACGACCGC
TACGCGACGT TCTCCACGGC GATCATCGCG TCGATGGTGA TCATCCCGCT GCAGACGGTG
ATCCCCGAGG AGATCGCCTT CCGCGGCGCA CTGCACGGCA CGCTGTCGCG GGCGATGAAG
TTCCGCTGGG TGGTGGTGAC CGGTTCGCTG CTCTTCGGGT TCTGGCACAT CGCCTCGTCA
CTCGGTCTCA CCGCCGGCAA CGCCGGGCTC ACCAAGATCC TCGGCAGCGG CCCCCTGGCA
CAGATCGCGG GAATCGCCGG AGCGGTGCTC GCGACCGCGC TCGCCGGTTA CGTCTTCACC
TGGCTGCGCA CCCGCAGCGG CTCTCTCATC GCGCCCATCG CGCTGCACTG GTGCCTCAAC
GGCGCCGGCG CGCTGGCCGC CGCCTTCGCC TGGCAGCTCC TGCGCTGA
 
Protein sequence
MERVSSAAQP AVPEQSALRA AVSGVRAYVD IAVVVGVLVA TNLVAHFTGS WAALLAVPIS 
AAVLLGIARY RGLDWHELGL GREHWRSGAK YAAAAVFIVA TVIIVGALLP VTRGLFLNDR
YATFSTAIIA SMVIIPLQTV IPEEIAFRGA LHGTLSRAMK FRWVVVTGSL LFGFWHIASS
LGLTAGNAGL TKILGSGPLA QIAGIAGAVL ATALAGYVFT WLRTRSGSLI APIALHWCLN
GAGALAAAFA WQLLR