| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3056 |
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| Symbol | |
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| ID | 9157227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 3167604 |
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| End bp | 3168665 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | ABC transporter, periplasmic binding protein, thiB subfamily |
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| Protein accession | YP_003647988 |
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| Protein GI | 296140745 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.450675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACC TCGCGCGGAT CGGCCTCGTC CTCACGGCGG CGACCCTGGC GCTGAGCGCC
TGCGCGACGG ATACCGCACC GTCGGCGCCG AGCGGCGCAC CGGCGGCCAC CGGGACCGTC
ACTCTGGTCA CCCACGATAG TTTCAGCCTG CCCGACGACG TGACCGCCGA GTTCACCCGG
CAGACCGGCC TGGAGCTGAA GACCGTGGCC CTGGGCGACG GCGGTGAGCT GGCCACCAAA
CTCGCTCTGA CCCCGGGGAA TCCGCCCGGC GACGTGGCCT TCGGCGTGGA TAACACCTAT
GCGGCCCGGC CCGCTCGCGC CGGTGTCTTC GACGACTACA CCTCACCCGC CGCCGCGAAC
GGGGCGGCGG ACTACGCGCT CGACGGCATC GGCGGACTCA CCGCGATCGA CTTCGGCGAC
GTCTGCGTGA ACATCGATAC CCGCTACTTC CAGGACAAGG GACTGCCCGA GCCGGCGACC
TACCGGGATC TCGCGGACCC GAAGTACCGC GGCCTCACCG TGGTCGAGCA TCCCGAGACG
GCCTCGCCGG GAATGGCCTT CCTCGCCGGC ACCGTCGCCG CGCTCGGTGA CGGCTGGAAG
GACTACTGGA CCGCACTGCG GGGCAACGAC GTCTCCGTGG TCCCGAACTG GAGCACCGCC
TACTCCACCG ATTTCTCCGG ATCGTCGGGC AGGGGTCCGC GGCCGATCGT GGTGTCCTAC
GCCAGCTCGC CCGTCGCGGA GGTGGGCAAG GACGGCGCAC CGCCGCCCAC GAAAGCCCTG
CTGGACACCT GCTTCCGGCA GGTCGAATAC GCCGGTGTGC TGCGCGGTAC CAAGAACCCC
GAGGGGGCGC GCAAACTGAT CGACTTCCTG CTCACGCCGC GCGCGCAGGG AGCGATACCG
GATGCGATGT ACGTGTACCC GGTGACTCGT GAGGTGCCGC TGCCGGCGTC CTGGCAGAAG
TTCGCGCCCG TGCCGCAGCG TCCGGCCACG CTCCCGGCCG ATCGGATCGC CGACGAGCGC
GACGGCTGGG TCCGCGACTG GCGGCAGATC ATGGGACGGT GA
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| Protein sequence | MKNLARIGLV LTAATLALSA CATDTAPSAP SGAPAATGTV TLVTHDSFSL PDDVTAEFTR
QTGLELKTVA LGDGGELATK LALTPGNPPG DVAFGVDNTY AARPARAGVF DDYTSPAAAN
GAADYALDGI GGLTAIDFGD VCVNIDTRYF QDKGLPEPAT YRDLADPKYR GLTVVEHPET
ASPGMAFLAG TVAALGDGWK DYWTALRGND VSVVPNWSTA YSTDFSGSSG RGPRPIVVSY
ASSPVAEVGK DGAPPPTKAL LDTCFRQVEY AGVLRGTKNP EGARKLIDFL LTPRAQGAIP
DAMYVYPVTR EVPLPASWQK FAPVPQRPAT LPADRIADER DGWVRDWRQI MGR
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