| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3055 |
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| Symbol | |
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| ID | 9157226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 3165983 |
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| End bp | 3167581 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003647987 |
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| Protein GI | 296140744 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.763133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCCGGG CGCGATACGC CCTGATCGCG GCGCCGCTGC TGTTCATCGG CGTCTTCTTC
CTCTGGCCGG TGGGCGCGAT CATCGCCCGC GGTCTCACCA CCGACGGACC CCCGCCCTGG
GACGGATTCA CCGGCGCCGG CGGTGTCGGT CTGGTGTGGT TCACCATGTG GCAGGCCGCC
GCGTCGACCC TGCTCACCGT GGTCCTCGGC CTGCCGCTGG CGTGGCTCAC CGCTCGCGCC
CGGTTCCGCG GTCAGTGGAT CGTCCGGGTG CTGGCGACGG TGCCCTTCGT GCTGCCGACG
GTGGTCGTCG GCGTGGCCTT CCGCACCCTG TTCGCCGCGG AGGGCGGGCT CGGTTTCCTC
GGCCTGTCCG AGACGGTCTG GGCGGTGCTC ATCGCGCACG CCTATTTCAA CGTTTCGGTG
GTGGCGCGCA TCGTCGGTGG GGTGTGGGCC GGCCTCGATC CGCGTGCGGC GCAGGCGGCC
CGGACGCTGG GAGCGAACCC GGTCCGCGCC TTCATGACCG CGACGATGCC GGCGCTGGCC
CCCGCGATCG CCTCGGCGGC GTCGGTGGTC TTCCTGTTCT GCGCCACCAG CTTCGGCATC
GTGCTGGTGG TGGGCGGTAG CCGATTCCGC ACCCTGGAGA CCGCGGTCTA CCAGGAGGTG
GTCGGTGCCT TCGACCTGCG CACCGCCGCG CTACTCGCAC TGGTGCAGAT CGCGATCGTG
GTGATCGCCG TGCTGGTGAG TGCGGCACTG CGGCACCGCG GCAGCCGGCC GGCGTCGTCG
GCCGCACTGC CTTCCCGGCC CGGTCGAGGG ACCCGGATCG CCGTGCTCAT CGGCGTGCCC
GTGTCGACCG TACTGCTCGC CTATCCGATG GTCTCGCTCG TGCTGCGCTC GCTGCGGCCC
GACGCCGCAA CAGGTCTGAG TCTCGGTGCC TACCGGCGCC TGGGTGAGAA CGTGAACGGC
GTGGTGCCGC TCAAGGCCCT GCAGATGTCG CTGCTGACCG CGATCCAGGC GGGGGCGATC
GCGCTCATCG TCGGTGGACT GGCCGCCATC GCCATCTCGC GGTCGTCGGG TCTCCTCAGC
CGGTTCGCCG ACGCCGTCGT GATGCTCCCG CTGGGGGTGA GTGCGGTGAC ACTCGGCTTC
GGCTATCTGC TGGCGCTGCA ATCGCTCCCG GCAATGCGCG AATCCCCGGC GGTGTTGCCC
TTCGTCCAGG CCCTGGTCGC GGTACCACTG GTAGTACGGG TGCTGGTGCC CGCGCTGGCC
GCCGTCGATC CGCGGCAGCG ACAGGCCGCC GCCGTCCTCG GGGCCTCGCC GGTGCGGGTC
TTCACCACGG TCGATCTGCC CGTGATCGGC CGATCCGTGG CCGTGGCAGC CGGGTTCGCG
TACGTGGTGA CCCTGGGGGA GTTCGGTGCG GCGAGCTTCC TGGTGCAGCC GGGCCAGATG
ACGCTACCGG TCCTGATCGG TCGCATCATG GCCCGGCCCG GCTACGAGAG CGCCGCGCTC
GCCGCGGCCT GCTCGGTTCT GCTCATCGCG GCCACCGTGG CGGTGATCGC TGCGGTCGAG
GCACTCCGGC GCGACGGTGC CGGCCAGGCG GAATTCTAA
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| Protein sequence | MTRARYALIA APLLFIGVFF LWPVGAIIAR GLTTDGPPPW DGFTGAGGVG LVWFTMWQAA
ASTLLTVVLG LPLAWLTARA RFRGQWIVRV LATVPFVLPT VVVGVAFRTL FAAEGGLGFL
GLSETVWAVL IAHAYFNVSV VARIVGGVWA GLDPRAAQAA RTLGANPVRA FMTATMPALA
PAIASAASVV FLFCATSFGI VLVVGGSRFR TLETAVYQEV VGAFDLRTAA LLALVQIAIV
VIAVLVSAAL RHRGSRPASS AALPSRPGRG TRIAVLIGVP VSTVLLAYPM VSLVLRSLRP
DAATGLSLGA YRRLGENVNG VVPLKALQMS LLTAIQAGAI ALIVGGLAAI AISRSSGLLS
RFADAVVMLP LGVSAVTLGF GYLLALQSLP AMRESPAVLP FVQALVAVPL VVRVLVPALA
AVDPRQRQAA AVLGASPVRV FTTVDLPVIG RSVAVAAGFA YVVTLGEFGA ASFLVQPGQM
TLPVLIGRIM ARPGYESAAL AAACSVLLIA ATVAVIAAVE ALRRDGAGQA EF
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