| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3052 |
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| Symbol | |
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| ID | 9157223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 3161566 |
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| End bp | 3162777 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | HNH endonuclease |
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| Protein accession | YP_003647984 |
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| Protein GI | 296140741 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00448111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAGG AAAACAGCGA CTCAGGGCCT GGCGGTGATG TGGTCGCCGG GCTGTCCGCG
TTGGAGCGGT TGCGTGCGCG GGTGGTGTTC GATCAGTACC GGTTGATCGT CGAGTTGCTG
CGCACGCGGG TGTGTGAGCG GATCGCGGCG GGTGTCGCGC AGGAGCGGTG GGAGGCCGGT
GTCGCGTCCG AGGTGGCGCT CGCACTGCGG GTCTCGCCGC ATCGGGCCGC GGCGATGCTG
TCGCGGGCGA CGGTGTTGGA ACGGGACCTG CCCGCCACGC TGGGTCGGTT GCGTGATGGT
GACCTCTCAC CGGAGGCGGT GGAGGTGATC GTGTCCGGGG TCTCGCACCT GGAACCCCGC
CTGAAGACCG AAGCCGACAA CGAGTTGTGC GGGGAGAGCT TCGTGGCGTC CGGGCTCGGG
CTGAGACGGT TGCAGGATCA GGTCAAAGAG GTGGCTTATC GGCTCGATGC CCGGGCCACG
GTCGATCGTG CGGCGCTGGC GGCGAAAGAT CGTCGCGTCA CGATCCGTCC GGCACCGGAC
TGCATGGCGC GAGTATCGAT CCTGCTGCCG GTCGCCCAAG CCGTCGGCGT CTATGCGGCG
GTGAAGACGG CCGCCGACAG CATCTTCGGC ACCCCAGGCG AGAGCCGCAG TCGCGGACAG
ATCATGGCCG ACACGGCTTT CGCCAGGATC ACCGGCCGCG ACATCGCGGA CGGTCTGCCC
GTCACGGTGA ACCTCACCAT GCCCGCAGCG GTGCTGCTCG GCGACCAGCC GGGAACCGCG
CACCTGGCCG GTGGCGGCAC ACTGCCGGGT GAGATCGCAC GGCACCTCGT CGGGCGAGCC
ACTGAGCATG CGGTGGCGTG GGTCAAACGG CTCTACGTGC GACCGGAGTC GGGTGCCGTG
GTCGGGCTCG ATTCCCGGTC GCGGCTGTTC CCGGCCGGAT TGGCGGAGCT GATCGCCGCG
CGGGATCGGT ACTGCCGCAC CCCGTACTGC GACGCCCCGA TCGCCCACAC CGACCACATC
ATTCCGGACG CGCACGGTGG CCGCACCAGC CTGGAGAACG GGCAGGGGCT GTGCGCGGCG
TGCAACTACG CCAAAGAAGC AGCGGGCTGG TCCAGCCGCA CCGTCGACGA CAGCAGCGGG
CGGCACACCG TCGAAACCCA CACCCCGACA GGACATCTGC ACCGGTCCAC CGCACCACCG
CAGGCGGCGT GA
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| Protein sequence | MEEENSDSGP GGDVVAGLSA LERLRARVVF DQYRLIVELL RTRVCERIAA GVAQERWEAG
VASEVALALR VSPHRAAAML SRATVLERDL PATLGRLRDG DLSPEAVEVI VSGVSHLEPR
LKTEADNELC GESFVASGLG LRRLQDQVKE VAYRLDARAT VDRAALAAKD RRVTIRPAPD
CMARVSILLP VAQAVGVYAA VKTAADSIFG TPGESRSRGQ IMADTAFARI TGRDIADGLP
VTVNLTMPAA VLLGDQPGTA HLAGGGTLPG EIARHLVGRA TEHAVAWVKR LYVRPESGAV
VGLDSRSRLF PAGLAELIAA RDRYCRTPYC DAPIAHTDHI IPDAHGGRTS LENGQGLCAA
CNYAKEAAGW SSRTVDDSSG RHTVETHTPT GHLHRSTAPP QAA
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