Gene Tpau_3046 details

Gene Information

• Locus tag: Tpau_3046
• ID: 9157217
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3156703
• End bp: 3158796
• Gene Length: 2094 bp
• Protein Length: 697 aa
• Translation table: 11
• GC content: 69%
• Product: UvrD/REP helicase
• Protein accession: YP_003647978
• Protein GI: 296140735

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.672611
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGAAG CACTGGACCC GGAGCAGCAG GAAGCGGTAC TCGCACCGCG CGGACCGGTC 
TGCGTGCTGG CGGGCGCCGG CACGGGCAAG ACCCGCACGA TCACCCACCG CATCGCGCAC 
CAGGTCTCCA CCGGCCACGT CGCGGCAGGT CAGGTTCTCG CCGTCACCTT CACCTCCCGC 
GCCGCGGGGG AGATGCGGGC TCGGCTGCGC GGCCTGGGCA TCGGCGGGGG CGACGGGACT 
CCGGGTGTCC AGGCCGTCAC CTTCCACGCC GCCGCGATGC GCCAGCTCCG CTACTTCTGG 
CCGCGGGCAG TGGGCGACAC CCGCTGGGAG TTGCTCGACA ACAAGTTCCC CATCGTGGGC 
CGCGCCGCGC GCGACTGCGA GCTGCGCCCC GAGACCGACA CCGTGCGCGA CCTGCTCGCC 
GAGATCGATT GGGCGAAGGC CTCACTGGTC ACCCCCGAGA CCTACGCGCA GGCCGTCGAA 
CAGGCCGGCC GCACCGCCCC GATGGCACCC GGCACCGTCG CCGATGTCTA CGCCGCGTAC 
GAGCGCCGCA AGACCGACCA GGACGGCAAC CGGCTCCTCG ACTTCGACGA TCTGATCCTG 
GTTACCGCGG CGATCCTGGA GGACAACGCC GTGGTCGCCG ACGAGTTCCG CGACCGCTAC 
CGCAGCTTCG TGGTCGATGA GTACCAGGAC GTCACCCCGC TCCAGCAGCA GCTCCTCAAC 
GCCTGGCTGG GCGACCGCGA CGATCTCACC GTGGTCGGCG ATGCGAATCA GACCATCTAC 
TCCTTCACCG GCGCCACCCC GAACTACCTG CTCGACTTTA CCCGCCGGTT CGAGGACGCG 
GTGATCGTCC GCCTGCAACG CGACTATCGC TCCACCCCGC AGGTGGTCTC CCTGGCCAAC 
AAGGTTATCG GCGCTGCACA GGGCCGCGTC GCGGGCACTC GGCTCGAACT CATCGGCCAG 
CGCCCCGACG GTCCGTCCCC GATCTATGCC GAGGCCGACG ACGAGCCTGC CGAGGCGAAG 
CTGGTGGCCA AGCGCATCCG AGAACTCATG GCCTCGGGCG TACCCGCCAG CGAGATCGCC 
ATTCTGTACC GGATCAACGC GCAATCGGCC GTCCACGAAG CCGCGCTCAC CGAGGCCGGC 
ATCCCGTACC AGGTGCGGGG CGGCAGCGCC TTCTTCGAAC GCCCCGAGAT CGGGCAGGCC 
GTCCGCGAAC TCATGTCGCG CGCGGGGCAG TTCGGCGGCA TCTCGGGCGA CGAGTTGATG 
TCGATGGTCG AAGGTGCGCT CGAACCGCTG GGGCGCACCA CAGAGCCGCC CGACGGTGCC 
CGTGCGCTCG AGCGGTGGCA GGCCCTCAAC GCTCTGGTCG AGCTGACCGC CGACCTCGCG 
AAACAACGAC CCGGCCTGAC CCTCGCCGAG CTCATCGGTG AGCTGCGCGC GCGGGCCGAG 
GCCAAGCATC CGCCCACCAT GGAGGGCATG ACACTTTCCT CGCTGCACGC GGCGAAAGGC 
CTGGAATGGG ACGCGGTCTT CCTCGTCGGT CTCACCGAGG GCTCCGTTCC GATCGCGCAG 
GCCATCGCCA AGGGAGACCC CGAACCGATC GAGGAGGAGC GCCGCCTGCT GTACGTGGGC 
GTCACCCGCG CCCGCGAACA CCTGCATCTG TCTTGGGCGC TCGCGCGGAA CGAGGGTGGC 
CGCAAGACCC GCAAGCGCAC CCGCTTCCTC GATGTGGTTT CCGCGCAGGC CGATGCGGGC 
CGTCCCCGCG TGGCGGATTC GGGGCCCTCG AAGGGGAAGC GGCGCTCCTC TGATATCTGC 
CGCGTGTGTG GCGGCATCCT CGACACCCGT GAGGAGAAGC TGCGCTCTCG CTGCGACGAC 
TGTCCGTCCG ACCTCAACGA TGCGTTGGTC GAGGCGCTGA AGATCTGGCG CACCGGGCAG 
GCGCGCGACC AGCAGATCCC TCCGTACACG ATCTTTTCCA ACGCCACCCT CTTCGCGATC 
GCCGAACACC AGCCGCGCAG CCGTGCGCAA TTGGTGCGGA TCAACGGGAT CGGTGCGACG 
AAGGCGGAGA AGTATGGCGA CGAGGTGCTG GCTCTCGTCG CCGAGCACGG CTGA 

 

Protein sequence

MIEALDPEQQ EAVLAPRGPV CVLAGAGTGK TRTITHRIAH QVSTGHVAAG QVLAVTFTSR 
AAGEMRARLR GLGIGGGDGT PGVQAVTFHA AAMRQLRYFW PRAVGDTRWE LLDNKFPIVG 
RAARDCELRP ETDTVRDLLA EIDWAKASLV TPETYAQAVE QAGRTAPMAP GTVADVYAAY 
ERRKTDQDGN RLLDFDDLIL VTAAILEDNA VVADEFRDRY RSFVVDEYQD VTPLQQQLLN 
AWLGDRDDLT VVGDANQTIY SFTGATPNYL LDFTRRFEDA VIVRLQRDYR STPQVVSLAN 
KVIGAAQGRV AGTRLELIGQ RPDGPSPIYA EADDEPAEAK LVAKRIRELM ASGVPASEIA 
ILYRINAQSA VHEAALTEAG IPYQVRGGSA FFERPEIGQA VRELMSRAGQ FGGISGDELM 
SMVEGALEPL GRTTEPPDGA RALERWQALN ALVELTADLA KQRPGLTLAE LIGELRARAE 
AKHPPTMEGM TLSSLHAAKG LEWDAVFLVG LTEGSVPIAQ AIAKGDPEPI EEERRLLYVG 
VTRAREHLHL SWALARNEGG RKTRKRTRFL DVVSAQADAG RPRVADSGPS KGKRRSSDIC 
RVCGGILDTR EEKLRSRCDD CPSDLNDALV EALKIWRTGQ ARDQQIPPYT IFSNATLFAI 
AEHQPRSRAQ LVRINGIGAT KAEKYGDEVL ALVAEHG