Gene Tpau_3009 details

Gene Information

• Locus tag: Tpau_3009
• ID: 9157178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3120007
• End bp: 3120753
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 65%
• Product: transcriptional regulator, IclR family
• Protein accession: YP_003647943
• Protein GI: 296140700

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.592723
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCAGA GCCTGACTCG CGCTCTCGAT ATCCTCACCC TGCTGGGCGA GGGACCGGCC 
TCGCTCGACG ACCTCGCGGA CTCGCTCGGA GTACATAAGA CCACCGTGCT GCGCCTGCTG 
CGACCACTCG TCGATGCCCG CTTCGCGTAT CACGATGAGC AGCATCGCTA TCACCTCGGA 
TCTCGCGTGT TCGACCTGGC GGCACGAGCT TCCGAGCAGC GCAGCATCCG CAGCATCGCC 
GCACCGCACC TGATCGCCTT CAACCGTGAG TACGGGCGGA CCACTCATCT CGCGGCGCGC 
GAGGGCGATG CGGTCGTGTA CATCGACAAA CTCGAATCAC GCGATCTGAT CCGGATGTAC 
TCCCGCGTCG GCATGGAGGC GAACCTCAAT TCCAGTGCCG TGGGCAAACT TCTCCTGGCC 
TCGCTGCCGG ATGCAGAACT GAAGCCGATC GTCGCGACCA TGGACTTCAC CCGCCGCACC 
GCCAACACGA TCGTCACCCC TCAGGAGTAT CTGGCGGAGA TCGCGCGCGT GCGGGAACAG 
GACTGGGCGA CGGACCGCGA GGAGAACGAG CCTTCGATCA ACTGCATCGG GGCTCCGGTC 
CGGGATGCCT CCGGTACAAC CGTGGCCGCG GTGTCGGTAT CGGTACCCGA TGTGGTGCTG 
CCTTTCGAAG ACCTACTCGA TCTGCTGGAC CCGCTGCGCG CGACGTGCGC GGCCATTTCC 
GCGGACTGCG GCTACCGACC GCGCTGA 

 

Protein sequence

MSQSLTRALD ILTLLGEGPA SLDDLADSLG VHKTTVLRLL RPLVDARFAY HDEQHRYHLG 
SRVFDLAARA SEQRSIRSIA APHLIAFNRE YGRTTHLAAR EGDAVVYIDK LESRDLIRMY 
SRVGMEANLN SSAVGKLLLA SLPDAELKPI VATMDFTRRT ANTIVTPQEY LAEIARVREQ 
DWATDREENE PSINCIGAPV RDASGTTVAA VSVSVPDVVL PFEDLLDLLD PLRATCAAIS 
ADCGYRPR