Gene Tpau_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3005 
Symbol 
ID9157174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3115378 
End bp3116001 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content72% 
IMG OID 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_003647939 
Protein GI296140696 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACCT CCCTACTCGA CGATCTCCGC GCCGACCGCG TGCTCACCGT CGTCCGCGCT 
CCCGATCTGC CCGATGCGGC GGCGCTGTGC CGGGCGCTCG CCGCCGGCGG CATCCGCACA 
GTGGAACTCA CCTTCACCAC GCCCGGGGTG CTCGACCATC TGGAGCGGGC CGCGACCGTC 
GTCGAAACCT GCCTCGGGGT GGGCACCGTG CGGACATCGG CGCAGGCCCG GGACGCGGTG 
AACGCGGGCG CCCGATTCCT GGTGACCCCC GATGTGAACG AAGACGTCGC GCAGACCGCG 
CGCGACTTCG GCATCCCCGT CTTCCTCGGG GCGCTCACTC CGACCGAAGT GGCACGTGCC 
GCCGCACTCG GCTCGGTAGC CGTGAAGATC TTCCCCGCCC GCGCCTTCGG GCCGGGCTAC 
CTCAAGGACC TGCACGGTCC GTTCCCGGGA CTGCCCCTGC TACCGTCCGG TGGCGTCAGC 
GAGAGCAATG CCCACGAATT CCTGGACGCG GGCGCGGTCG CCGTCTGCGC CGGCACGTCC 
GTCGTGCCAC CCGCCACCGT CGCCGCCGGC GACTGGGCCG ATATCACCAC GCGTGCCGCG 
CGTTTCGTGG CCGCTCTCGG ATAG
 
Protein sequence
MTTSLLDDLR ADRVLTVVRA PDLPDAAALC RALAAGGIRT VELTFTTPGV LDHLERAATV 
VETCLGVGTV RTSAQARDAV NAGARFLVTP DVNEDVAQTA RDFGIPVFLG ALTPTEVARA 
AALGSVAVKI FPARAFGPGY LKDLHGPFPG LPLLPSGGVS ESNAHEFLDA GAVAVCAGTS 
VVPPATVAAG DWADITTRAA RFVAALG