Gene Tpau_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3002 
Symbol 
ID9157171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3111449 
End bp3112195 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003647936 
Protein GI296140693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.527927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGGGTGA GCAAGGGTAA GAACGCCAAA TACGTTCCTG TGAAGCAGTC CAACACCATG 
ACCTACGTGT TGGGCGGAAT CGCCGTCCTG GTGGTGATCG TGGTCGTGAT CGGCGGCGTG 
CTGCTGCTGA GTAAGAAGGA GGGCACGCCG GCTGACAAGG TGACGGCCGC CATCAATGGC 
GCGACCCCGG TGTTCGTGCT CGGCAAGGAC GACGCCAAGA CCAAGCTGAC CTTCTTCGAG 
GATCCCTACT GCCCTGCCTG CGGCAACATG GAGCGCAATT ACGGCGAGCA GATCACCAAG 
GGCATCGAGG ACGGGAGCCT GCAGATCAAG TTCTTCATGC TGTCGTTCCT GAACCAGCAG 
AGCCCGTCCC GCGACTACTC CGACCGTGCC GGCGGCGGCC TTCTGGCGAT CGCCAAATCG 
TCACTGCCCG ACGACCAGAA GCAGAAGGCG TGGCTGGGCG CGCATAGCGC GATGTACGCG 
CAGCAGCCGC AGGAAGGTTC GGGTGACCGC GACAATGCCG GTCTCGCCAC CGTGATGGCC 
GACGGTGCGA AGTCGAAGGG GGTCGAGTTG CCCGCCGATG TGATCGCCGC GATCCGCGAC 
GGCAAGTACA CCGCTGAGTC GGCCACCAAC GCCGCCGCAG GCAGCAAGCT CATGCAGGAG 
ATCGGTAGCA CCGGTACTCC GACTGTGGTC AAGGACGGCG AGCTGCTCAA GGTCCAGGGC 
GATTGGCTCA CCCAGGCTAT GGCCTGA
 
Protein sequence
MGVSKGKNAK YVPVKQSNTM TYVLGGIAVL VVIVVVIGGV LLLSKKEGTP ADKVTAAING 
ATPVFVLGKD DAKTKLTFFE DPYCPACGNM ERNYGEQITK GIEDGSLQIK FFMLSFLNQQ 
SPSRDYSDRA GGGLLAIAKS SLPDDQKQKA WLGAHSAMYA QQPQEGSGDR DNAGLATVMA 
DGAKSKGVEL PADVIAAIRD GKYTAESATN AAAGSKLMQE IGSTGTPTVV KDGELLKVQG 
DWLTQAMA