Gene Tpau_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3000 
Symbol 
ID9157168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3109983 
End bp3110546 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content66% 
IMG OID 
Productperoxiredoxin 
Protein accessionYP_003647934 
Protein GI296140691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0960762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGCTGA TCAACAAGCA GATCAAGCCC TTCACCGCCG AGGCATTCAA GGACGGCAAC 
TTCGTCACCG TCTCCGATGA GGACATCAAG GGCAAGTGGG CCGTCTTCTA CTTCTACCCG 
GCCGACTTCA CCTTCGTCTG CCCCACCGAG CTCGGCGACC TCGCCGACCA CTATGAGGAG 
CTGCAGTCCC TCGGCGTCGA GGTCTTCTCG GTCTCCACCG ACACGCACTT CACCCACAAG 
GCGTGGCACG CCTCGTCGGA CACCATCGCC AAGATCAAGT ACGCCATGAT CGGTGACCCG 
AGCCTGCAGA TCAGCACCGA CTTCGAGGTG CTCCGCGAGG GCCAGGGCCT GGCGGACCGG 
GGCACCTTCC TGGTCGACCC CGACGGCGTG GTCCAGTTCA CCGAGGTCAC CGCCGAGGGC 
ATCGGCCGCA ACGCCGCTGA GCTCGTCCGC AAGGTCAAGG CCGCCCAGTA CGTGCGCTCG 
CACCCCGGCG AGGTCTGCCC CGCGAAGTGG GAAGAGGGCG CCGACGCCCT CGCTCCGTCG 
CTGGAGCTCG TCGGCAAGAT CTAA
 
Protein sequence
MSLINKQIKP FTAEAFKDGN FVTVSDEDIK GKWAVFYFYP ADFTFVCPTE LGDLADHYEE 
LQSLGVEVFS VSTDTHFTHK AWHASSDTIA KIKYAMIGDP SLQISTDFEV LREGQGLADR 
GTFLVDPDGV VQFTEVTAEG IGRNAAELVR KVKAAQYVRS HPGEVCPAKW EEGADALAPS 
LELVGKI