| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2999 |
|---|
| Symbol | |
|---|
| ID | 9157167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 3108316 |
|---|
| End bp | 3109893 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | alkyl hydroperoxide reductase, F subunit |
|---|
| Protein accession | YP_003647933 |
|---|
| Protein GI | 296140690 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.336504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAG CCTCGCTCGC CACTCAACTC AAGTCCCTGC TCGCGAACGT CACGATGCCC
GTCGAGCTGG TTTCGACGCT CGATGACGGC CCGAAGTCGG CCGAACTCGC GGAGCTGCTC
GACGAGATCG CGGGCATGTC CGAGCACATC ACCCACGACC GGACCGGCGA TGACCCGCGG
ACCCCGTCGT TCCTGATCCG GCGCGCAGGC ACCGACATCG CGGTGCAGTT CGCCGGAATT
CCTCTGGGGC ATGAGTTCTC GTCGCTCGTG CTCGCCCTGC TCCAAGTGGG TGGTCATCCG
TCGAAGGAGG CCGCCGAGCT GCTGGAGCAG GTCCGCGAGC TCGACGGCGA CTACCACTTC
GAGACCTACT TCTCGCTGTC CTGCCAGAAT TGCCCGGACG TGGTTCAGGC ACTGAACCTC
ATGTCCGTGC TCAACCCGCG CATCACGCAC ACCGCGATCG ACGGCTCGCT GTTCCAGGAC
GAGGTCGATA GCCGCCAGGT GATGGCCGTG CCGACCGTCT TCGTCAACGG CGAGCCGTTC
GACTCCGGCC GCATGACTCT AGAGCAGATC GTCGGCAAGC TCGACGACGG TGCCGCCGAG
CGCACCGCCG CCTCGCTCGC CGAGAAGGAC CCGTTCGACG TGCTCGTCGT GGGCGGCGGT
CCCTCCGGTG CCACCGCTTC GGTGTATGCC GCCCGCAAGG GGATTCGCAC CGGTATCGTC
GCCGAGCGCT TCGGCGGCCA GGTGCTCGAC ACCATGGCCA TCGAGAACTT CACCTCGGTC
AGCTACACCG AGGGCCCGAA GTTCGCGGCC GAGCTCGAGA ACCAGGTGCG CCAGTACGAC
GTCGAGATCA TGAACACCCA GCGCGGTGCG CACCTGCGCC GCGACGAGGC GACCGGCATG
ATCTCCGTCG AGCTCACGAG CGGCGCTGCG CTGCAGTCGC GCACCGTCGT CATTTCCACG
GGCGCCCGGT GGCGTTCCAT GGACGTGCCC GGCGAGGCCG AGTACCGCAA CAAGGGCGTC
ACCTACTGCC CGCACTGCGA TGGCCCGCTG TTCAAGGGCA AGCGCGTTGC CGTGATCGGC
GGCGGCAACT CGGGTGTCGA GGCCGCGATC GACTTGGCGG GCATCGTCTC CCACGTCACG
CTCATCGAGT TCGACTCCGA ACTGCGCGCC GATCAGGTGC TCCAGCGCAA GCTGCGCAGC
CTGCCCAACG TCGATGTCCT CGTCAGTGCG ATGACCACCG AGGTGCTCGG CGACGGCGGT
AAGGTCACCG GCCTCACCTA CACGAGCCGC ACCAGCGATG AGTCTCACAC GCTCGAGTTG
GACGGGGTCT TCGTGCAGAT CGGCCTGCTG CCCAACACCG AGTGGCTGGA GGGCACTCTG
GAATTGAGCG CCCGCGGCGA GATCGTCGTC GATGAGGCGG GCCGCACCTC GGTGCCCGGT
GTGTTCGCCG CCGGCGACTG CACCACCGTG CCGTTCAAGC AGATCGTGGT CGCCGCAGGT
GCCGGCGCCA CGGCCGCGCT GAGTGCCTTC GACCACATCA TCCGTACCGA CGTCCCGGCC
GACGTCGTCG CCGGCTGA
|
|---|
| Protein sequence | MLEASLATQL KSLLANVTMP VELVSTLDDG PKSAELAELL DEIAGMSEHI THDRTGDDPR
TPSFLIRRAG TDIAVQFAGI PLGHEFSSLV LALLQVGGHP SKEAAELLEQ VRELDGDYHF
ETYFSLSCQN CPDVVQALNL MSVLNPRITH TAIDGSLFQD EVDSRQVMAV PTVFVNGEPF
DSGRMTLEQI VGKLDDGAAE RTAASLAEKD PFDVLVVGGG PSGATASVYA ARKGIRTGIV
AERFGGQVLD TMAIENFTSV SYTEGPKFAA ELENQVRQYD VEIMNTQRGA HLRRDEATGM
ISVELTSGAA LQSRTVVIST GARWRSMDVP GEAEYRNKGV TYCPHCDGPL FKGKRVAVIG
GGNSGVEAAI DLAGIVSHVT LIEFDSELRA DQVLQRKLRS LPNVDVLVSA MTTEVLGDGG
KVTGLTYTSR TSDESHTLEL DGVFVQIGLL PNTEWLEGTL ELSARGEIVV DEAGRTSVPG
VFAAGDCTTV PFKQIVVAAG AGATAALSAF DHIIRTDVPA DVVAG
|
|---|
| |