Gene Tpau_2973 details

Gene Information

• Locus tag: Tpau_2973
• ID: 9157141
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3085127
• End bp: 3085723
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 70%
• Product: transcriptional regulator, TetR family
• Protein accession: YP_003647908
• Protein GI: 296140665

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGGTC CACTGATCCC CCTCGCCCAG CCGCAGGCCG GCCCGCGGCG CGATGCCGCG 
CGCAATCGCG AACTGCTGAT CGATGCCGCA CAGCGTCTGT TCGCCGAGCA CGGCGTGGAT 
GCGGTGAGCA TGGACGCGGT CGCGCAGGCG GCGGGGGTGG GCAAGGGCAC CGTCTTCCGC 
CGCTTCGGTT CCCGCGCGGG CCTGCTCCAG GCCCTTCTGG ACCACGACGA GATCGAACTG 
CAGCAGACCT TCATGTTCGG TCCGCCACCT CTGGGGCCCG GTGGAGATCC GACGGAGCGC 
CTCGTCGAAT ACGGCAAGGC CCGGATGCAG ATGATCGCGC GCCACGGCGA CCTGCTCCGC 
GGCGCCGAAC AGGCCGCCCG CGATCCGTAC GACGAGCCTC CGTGGCGGGT GTCCGCGATG 
ACCGTGCGAT CCATGCTGGT GGCAGCGGGC CGCACCGCGC AGGCCGATGT GTGGGCTGCT 
GCACTGATGT CCACGCTGAG TCCCGCCTGG GTGCTACACC AGCTCGCCTC CGGCGTCTCG 
CAGGAGACGC TGGACTCGGT GTGGTCAGAG CATGTACGAC TATTGACCGC TCTCTGA 

 

Protein sequence

MTGPLIPLAQ PQAGPRRDAA RNRELLIDAA QRLFAEHGVD AVSMDAVAQA AGVGKGTVFR 
RFGSRAGLLQ ALLDHDEIEL QQTFMFGPPP LGPGGDPTER LVEYGKARMQ MIARHGDLLR 
GAEQAARDPY DEPPWRVSAM TVRSMLVAAG RTAQADVWAA ALMSTLSPAW VLHQLASGVS 
QETLDSVWSE HVRLLTAL