Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2942 |
Symbol | |
ID | 9157110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3050233 |
End bp | 3051978 |
Gene Length | 1746 bp |
Protein Length | 581 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | cytochrome c oxidase, subunit I |
Protein accession | YP_003647879 |
Protein GI | 296140636 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCGC AAGCGCATCG TCCGGCAGTC GAGGTGACCG CCGAGCGTCC GTATCCGCAG CGGACCGGGC CCAAGGGGTC GTTCATCTAC AAGCTGGTGA CGACGACCGA TCACAAGACG CTGGGCATCA TGTACATCGT CACGTGCTTC GCGTTCTTCC TCATCGGCGG CCTGATGGCG CTGCTGATGC GCGCCGAGCT CGCCGAACCC GGCCTGCAGT TCCTCTCCAC CGAGCAGTTC AACCAGCTGT TCACCATGCA CGGCACCGTG ATGCTGCTGC TGTACGCGAC CCCGATCGTG ATCGGCTTCG CGAACTTCGT GCTGCCACTG CAGATCGGCG CGCCCGACGT GGCCTTCCCC CGACTGAACG CCTTCGGCTA CTGGCTGTTC GTGTTCGGCG CGATCATGGT GATCTCCGGC TTCATCTCCC CCGGTGGTGC CGCCGACTTC GGCTGGACCG CCTACACCCC GCTGACCGAC GCCCTCCACT CGCCCGGCCC CGGCGCCGAC CTGTGGATCA TGGGCCTCGC GGTCGGTGGC CTCGGCACCA TCCTCGGCGC CGTCAACATG GTGACCACCG TGGTCTGCAT GCGCGCCCCG GGTATGACCA TGTTCCGTAT GCCGATCTTC ACCTGGAACA TCCTGGTGAC CTCGGTGCTG ATCCTCCTCG CCTTCCCGCT GCTCACCGCA GCGCTCATGG GGCTGGAGGC CGACCGCCAA TTCGGCGCCC ACATCTACGA CCCCGCCAAC GGCGGCGTGA TCCTGTGGCA GCACCTGTTC TGGTTCTTCG GACACCCCGA GGTGTACATC ATCGCGCTGC CCTTCTTCGG CATCGTCTCG GAAATCTTCC CGGTGTTCAG CCGCAAGCCG ATCTTCGGTT ACAGCGGCCT GGTGCTGGCG ACCCTCGCGA TCGCCGCGCT GTCCGTGGCA GTGTGGGCGC ACCACATGTA CGCCACCGGC GCCGTGCTGC TGCCCTTCTT CAGCTTCATG ACCTTCCTGA TCGCCGTGCC AACGGGCGTG AAATTCTTCA ACTGGATATT CACGATGTGG AAGGGGCGGA TAACTTTCGA ATCGCCGATG CTGTTCTCCA TCGGCTTCGT CGTGACCTTC CTCTTCGGTG GTCTGACCGG TGTGCTGCTG GCCTCGCCGC CGCTCGACTT CGCGGTCTCC GACACCTACT TCGTGGTTGC CCACTTCCAC TACGTGCTCT TCGGCACCAT CGTGTTCGCG ACCTACGCCG GCATCTACTT CTGGTTCCCG AAGATGACGG GCCGCCTGCT CGACGAGGGG CTCGGCCGCT GGCACTTCTG GCTCACCTTC ATCGGCTTCC ACATGACCTT CCTGGTCCAG CACTGGCTGG GCGCCGAGGG CATGCCGCGC CGTTACGCCG ACTACCTCGC GTCCGACGGT TTCACCACGC TCAACCGCAT CTCGACCGTG GGTGCGTTCA TCCTGGGCGC CTCGACCCTG CCCTTCGTGT GGAACGTCTT CAAGAGCTAC CGCTACGGCG AGGTCGTCAC GGTCGACGAC CCGTGGGGCT TCGGCAACAG CCTCGAGTGG GCCACCAGCT GCCCGCCGCC GCGGCACAAC TTCACCGAGC TGCCCCGGAT CCGTTCGGAG CGCCCGGCGT TCGAGCTGCA CTACCCGCAC ATGATCGAAC GGATACGGAC CGAGGCCCAC GTGGGACCCG GCCACAAATC CGAGATCGAC ACCGAACGGG TCAGCAGCGG CAAGGGCGAC ATCTAG
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Protein sequence | MTAQAHRPAV EVTAERPYPQ RTGPKGSFIY KLVTTTDHKT LGIMYIVTCF AFFLIGGLMA LLMRAELAEP GLQFLSTEQF NQLFTMHGTV MLLLYATPIV IGFANFVLPL QIGAPDVAFP RLNAFGYWLF VFGAIMVISG FISPGGAADF GWTAYTPLTD ALHSPGPGAD LWIMGLAVGG LGTILGAVNM VTTVVCMRAP GMTMFRMPIF TWNILVTSVL ILLAFPLLTA ALMGLEADRQ FGAHIYDPAN GGVILWQHLF WFFGHPEVYI IALPFFGIVS EIFPVFSRKP IFGYSGLVLA TLAIAALSVA VWAHHMYATG AVLLPFFSFM TFLIAVPTGV KFFNWIFTMW KGRITFESPM LFSIGFVVTF LFGGLTGVLL ASPPLDFAVS DTYFVVAHFH YVLFGTIVFA TYAGIYFWFP KMTGRLLDEG LGRWHFWLTF IGFHMTFLVQ HWLGAEGMPR RYADYLASDG FTTLNRISTV GAFILGASTL PFVWNVFKSY RYGEVVTVDD PWGFGNSLEW ATSCPPPRHN FTELPRIRSE RPAFELHYPH MIERIRTEAH VGPGHKSEID TERVSSGKGD I
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