Gene Tpau_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2940 
Symbol 
ID9157108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3047674 
End bp3048939 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content70% 
IMG OID 
Productphosphoserine phosphatase SerB 
Protein accessionYP_003647877 
Protein GI296140634 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGTGG TCTTCGACGG TGCCGTCTAC GCTTCTCGCG TGCACGATTC CTCGGCCCCC 
ACGATCCTCA TCACCGTGAC CGGCGGCGAT AAGCCCGGCG TGAGCTCCGT CCTGTTCGGC
GTCCTCGCGC GGAACGCGGT CAGCATCCTC GACGTCGAGC AGACCGTGAT CCGCGGCCGG
CTCACCCTGG GCGTGCTCGC CTCGGTCGAC GGCGACCCGG AGCACGTGCA GGAACTCGTC
GAGCAGTCGA TGGCCACCGT CGGGATGGAC GTGGCGGTCG AGATCTCGGG TGAGCAGCCG
CAGCGCCCGC CGGTCCCGAC CCACGCCGTG GTGCTGCTCG GAGCCCCGAT CACCGCGAAG
GCCTTGTCTG CGGTCGCCGC CACCCTCGCC GCGGGGAGCG TGAACATCGA ATCCATTTCC
GGTATCGCCG ACTATCCGGT GACAGCGCTG GAGCTACTGG TCACGGTGCC CGATGTGCCC
GGCGGCGATG CGCGCCTGCG CGCCGATCTG GCCGCGGTCT CGAAGGAGCA GGGCGTCGAC
ATCGCCACCT CGCGCGCCGG TATCGCGCGC CGCTCGAAGC GGCTGATCTG CTTCGACGTC
GATTCCACCC TGGTGCAGGG CGAGGTCATC GAGATGCTCG CCGCCCGCGC CGGCAAGGAG
GCCGAGGTCG CGGCGGTCAC CGAGGCCGCG ATGCGCGGCG AACTCGACTT CGAGCAGTCG
CTGCACGCCC GTGTGCGGGC CCTCGCCGGA CTGCCCGCCT CCGTGATCGA CGAGGTCGCC
GCCGAGCTGC AATTGACCCC CGGAGCTCGC ACCACCATCC GCACCCTCAA GCGGCTCGGT
TACCGGTGCG GTGTGGTCTC CGGCGGTTTC ACCGCCGTGA TCGAGCCCCT CGCCGCCGAA
CTCGAACTCG ACTTCGTGCG TGCCAACACG CTGGAGATCG TCGACGGTGT GCTCACCGGC
CGGGTGATCG GCGAGGTCGT CGATCGACCC GGTAAGGCCC GCGCGCTCGG CGAATTCGCC
GCCGCCTACG GTGTGCCGGT GGACCAGACC GTTGCGGTGG GCGACGGTGC CAACGACATC
GACATGCTCA CCGCCGCAGG CCTCGGGGTG GCGTTCAACG CCAAGCCCGC GCTGCGCGAG
GTGGCCGACA CCGCCCTCTC ACATCCGTAC CTCGATGCGG TGCTGTTCGT TCTCGGCGTG
ACCCGCGACG AGATCGAGGC CGCCGATGCC GTCGACGGTC ACGTGCGCCG CGTTCCGCTG
GCCTAG
 
Protein sequence
MTVVFDGAVY ASRVHDSSAP TILITVTGGD KPGVSSVLFG VLARNAVSIL DVEQTVIRGR 
LTLGVLASVD GDPEHVQELV EQSMATVGMD VAVEISGEQP QRPPVPTHAV VLLGAPITAK
ALSAVAATLA AGSVNIESIS GIADYPVTAL ELLVTVPDVP GGDARLRADL AAVSKEQGVD
IATSRAGIAR RSKRLICFDV DSTLVQGEVI EMLAARAGKE AEVAAVTEAA MRGELDFEQS
LHARVRALAG LPASVIDEVA AELQLTPGAR TTIRTLKRLG YRCGVVSGGF TAVIEPLAAE
LELDFVRANT LEIVDGVLTG RVIGEVVDRP GKARALGEFA AAYGVPVDQT VAVGDGANDI
DMLTAAGLGV AFNAKPALRE VADTALSHPY LDAVLFVLGV TRDEIEAADA VDGHVRRVPL
A