Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2930 |
Symbol | |
ID | 9157098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3037248 |
End bp | 3037829 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003647867 |
Protein GI | 296140624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.585103 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCTG AACAGCAGCG GACAGCCGTG CTGGACGCCG CGGAGAGGTT GTTCTACGGC AAGGGGATCC AGGCCGTGGG GATGGACGAG ATCCGTGCCG CCGCGGGTGT CTCGCTCAAG GCGATCTACA AGCTGTTCCC GTCGAAGGAT CTGCTCGTTG CCGAGGTGCT GGCGATTCGG GACCGCCGCT GGACAGACGG CCTGCACAAG TACGTCGACC GCGCAGACAC TCCGGAAGAT AAGGTGCTCG CAGTCTTCGA CTGGCTCGAC GAGATGTTCG CCGAGAACGA CTTCCGCGGT TGCTCGTTCA TCAACAGCTA CGGCGAACTC GGTGCTACGT CACCCACCGT CGCGCAGGCG GCACAGCACA ACAAGTCCTG CTATCAGGAC GAGGTCAACG CCCTGGTCGC CGACGCCGGG CTACCGCCGA CCGTCGCCGT GCAGGTCGGC TTGCTCACCG AAGGGGCGCT CGCAACGGCG GCCATTCTCG GCCCGGACGG CGTGGCCGAC GGTGCGCGGC AGGCCGCGAG AGTGCTGATC GGTGCTCAGC GCTCGGTGGG GGCTCGCACT GCCGAGGAGT GA
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Protein sequence | MDAEQQRTAV LDAAERLFYG KGIQAVGMDE IRAAAGVSLK AIYKLFPSKD LLVAEVLAIR DRRWTDGLHK YVDRADTPED KVLAVFDWLD EMFAENDFRG CSFINSYGEL GATSPTVAQA AQHNKSCYQD EVNALVADAG LPPTVAVQVG LLTEGALATA AILGPDGVAD GARQAARVLI GAQRSVGART AEE
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