Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2866 |
Symbol | |
ID | 9157034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 2972379 |
End bp | 2974220 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_003647803 |
Protein GI | 296140560 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACCGC TCCGTTCACG CACCACCACC GTCGGCCGCA ACGCCGCGGG CGCCCGCTCG CTCTGGCGCG CCACCGGCCT CACGGACAGC GATTTCGGTA AACCCATCGT GGCGATCGCC AACTCGTACA CGCAGTTCGT TCCCGGCCAT GTGCACCTCA AGGACATGGG CGAGATCGTC GCCGAATCGG TCCGCGCGGC GGGCGGCGTC GCCCGCGAGT TCCACACCAT CGCCGTGGAC GACGGCATCG CCATGGGCCA CGGAGGCATG CTCTACAGCC TGCCCAGCCG CGAGATCATC GCCGACTCCG TGGAGTACAT GGCGAACGCC CACACCGCCG ACGCGCTGGT CTGCATCTCC AATTGCGACA AGATCACCCC GGGCATGCTC AATGCTGCGA TGCGCCTGAA CATCCCCACC GTGTTCGTCT CGGGGGGCCC GATGGAAGCC GGTAAGGCCG TCATCGTCGA CGGGATCGCC AAGGCACCCA CCGACTTGAT CACCGCGATC TCCGCATCGG CCAACGACGC GATCGACGAC GCCGGCCTCA GCGAGGTCGA GCGGTCCGCG TGCCCCACCT GTGGGTCCTG CTCGGGCATG TTCACCGCCA ACTCGATGAA CTGCCTCACC GAGGCGCTCG GCCTCGCCCT GCCGGGCAAC GGTTCGACGT TGGCCACCCA CGCCGCCCGT CGCGCGCTGT TCGAGCGGGC CGGCACCGTC GTGGTCGAGG CGGCCAAGCG TTATTACCGC GACGGCGACG AATCGGTGCT CCCGCGCAAC GTCGCCACCC CCGCCGCGTT CCGCAACGCC ATGGCCCTCG ATGTGGCGAT GGGCGGTTCC ACGAACACCG TGCTGCACAC GCTGGCCGCC GCACAGGAGG GTGAGGTCGA CTTCGACCTG TCCACCATCG ACGCGATCAG CCGCAAGGTG CCCTGCCTGT CGAAGGTGTC GCCGAACAGC GACTACCACA TGGAGGACGT GCACCGGGCC GGCGGAATCC CCGCCATCCT GGGCGAGCTG CGCCGCGGCG GACTACTGGA AACGGACGTG CACACCGTGC ACGAGCAGTC CTTCGACAAG TGGCTCGACG ACTGGGACAT CCGTTCCGGC AAGGCCACCG ACGAGGCGCT CGAACTCTTC CACGCCGCCC CCGGTGGCGT GCGCACCACG CAGCCCTTCT CCACGAAGAA CCAGTGGGAG AGCCTGGACA CCGATCAGGT GAACGGCTGC ATCCGCGACA TCGAGCACGC CTACACCGTC GAGGGCGGGC TGTGCGTGCT GCGCGGCAAC ATCGCCGTCG ACGGCGCGAT CCTCAAGACC GCGGGCATCG ATGAGGAACT GTTCACCTTC GAGGGACCGG CCGTGGTGGT CGAATCGCAG GAGGAGGCGG TCTCGAAGAT CCTCGGCAAG CAGATCAAGC CGGGCGACGT GGTGGTGGTC CGCTACGAGG GCCCCAAGGG TGGCCCGGGC ATGCAGGAGA TGCTGCACCC CACGTCCTTC CTCAAGGGCC GCGGGCTGGG CAAGCTGTGC GCATTGATCA CCGACGGCCG GTTCTCCGGT GGCACCTCGG GCCTGTCCAT CGGCCACATC TCCCCCGAAG CCGCGGCCGG GGGCGTCATC GGCCTGGTGG AGGACGGTGA CCGCATCCGG ATCGACGTGC ACACCCGCGC CCTGGAAGTG CTGGTCGACG ACGACGAGCT GGACCGCCGC CGGGCCAAGA TGGAGGCCTC GGAGCGGCCG TGGCAGCCCA AGGACCGCCA GCGCACCGTC ACCACCGCGC TGCGCGCCTA CGCAGCCCTG GCCACCTCGG CCGATCGCGG CGCCGTGCGG CACGTGCCGT GA
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Protein sequence | MPPLRSRTTT VGRNAAGARS LWRATGLTDS DFGKPIVAIA NSYTQFVPGH VHLKDMGEIV AESVRAAGGV AREFHTIAVD DGIAMGHGGM LYSLPSREII ADSVEYMANA HTADALVCIS NCDKITPGML NAAMRLNIPT VFVSGGPMEA GKAVIVDGIA KAPTDLITAI SASANDAIDD AGLSEVERSA CPTCGSCSGM FTANSMNCLT EALGLALPGN GSTLATHAAR RALFERAGTV VVEAAKRYYR DGDESVLPRN VATPAAFRNA MALDVAMGGS TNTVLHTLAA AQEGEVDFDL STIDAISRKV PCLSKVSPNS DYHMEDVHRA GGIPAILGEL RRGGLLETDV HTVHEQSFDK WLDDWDIRSG KATDEALELF HAAPGGVRTT QPFSTKNQWE SLDTDQVNGC IRDIEHAYTV EGGLCVLRGN IAVDGAILKT AGIDEELFTF EGPAVVVESQ EEAVSKILGK QIKPGDVVVV RYEGPKGGPG MQEMLHPTSF LKGRGLGKLC ALITDGRFSG GTSGLSIGHI SPEAAAGGVI GLVEDGDRIR IDVHTRALEV LVDDDELDRR RAKMEASERP WQPKDRQRTV TTALRAYAAL ATSADRGAVR HVP
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