Gene Tpau_2836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2836 
Symbol 
ID9157001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp2937856 
End bp2938479 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content69% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003647773 
Protein GI296140530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00562159 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGATT CCCCCTCCGC CGAGCGGCGT CCGGCGCCCG TGCAGCGCCG CGGGCAGGTA 
CGGCGGGACG CGATCCTTGA CGCCGCGGAG GCACTGTTCA TCGAATCCGG CTACGAGGGC 
GCCACGCTGA AGGCGATCAG TGAGCGCACC GGGATTCCTC TTGCGTCCGT CTACCACTAC 
TTCAAGGACC GTGGGCAGGT CGATGGCGAG GTGGCGCGGC GACATGCCGA AGACCTGACC 
GCATCCGTCG TCTCGGCAGT ACAGGAGGCC GACCGGCGCT CCGATCTGGA CCGGGTGCTC 
AGCCTGGTGG TGCATGCGTT CGTCGGGTAC TACCGCCGGC ACCCGGGGTT CGTGGAATTG 
TGGCTGGCCA GGCGCAACGC CGTACTCAGT GAGGTCGCCG AGGAGTTCGA CATGGTCCAG 
TCGGACAAGC TCTGGCGGCT ACTGATCGAC CGCGACCTGA TCGCCGCCGA CACCCCCGCG 
CTCGTGGTGC GCCTGGCGTA CGAGGCCGGT GCTCGCCTGC TGGACCTCGC CTTCGGCGAC 
GACCGGCACG GCGATGATGC GGTGATCGCC GAGGCGGTGC GGCTGCTGAG TTCCTATCTC 
GGCTCGTACG CCCCCATGAC CTGA
 
Protein sequence
MADSPSAERR PAPVQRRGQV RRDAILDAAE ALFIESGYEG ATLKAISERT GIPLASVYHY 
FKDRGQVDGE VARRHAEDLT ASVVSAVQEA DRRSDLDRVL SLVVHAFVGY YRRHPGFVEL 
WLARRNAVLS EVAEEFDMVQ SDKLWRLLID RDLIAADTPA LVVRLAYEAG ARLLDLAFGD 
DRHGDDAVIA EAVRLLSSYL GSYAPMT