Gene Tpau_2783 details

Gene Information

• Locus tag: Tpau_2783
• ID: 9156948
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 2879630
• End bp: 2881618
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 68%
• Product: glycoside hydrolase 15-related protein
• Protein accession: YP_003647720
• Protein GI: 296140477

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.818274
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCCGA AGCAGAACGC AGTAGCAGAC AGCGCCGATG CCGTCGTCAC GGCAGCGGCA 
GCCGAGGTCG CGGCGGTGGT CGTCGGCGAC AACGCCTTCC CGCCGATCCA CGACTACGCC 
TTCCTCTCGG ACTGCGAGAA CACCTGCCTG ATCGCGCGGG ACGGCAGCGT CGAGTGGATG 
TGCATCCCTC GCCCGGACTC CCCCAGCGTG TTCGGCGCCA TCCTGGATCG CGGTGCGGGA 
TCGTTCCGGC TCGCCCCGTA CGGGGTGCGA GTCCCGGTCG ACCGCCGCTA CCTGCCCGGC 
AGCCTGATGT TGGAGACCAC GTGGCAGACC TCCACAGGCT GGCTCATCGT GCGGGACGCC 
CTGGTCATGG GGCCGTGGCA CGACACCCAG ACACGGTCCC GCACGCACCG TCGCACTCCC 
ACCGACTGGG ATGCCGAGCA CATCCTGCTG CGCACCGTTC GGTGCGTTTC GGGCACGGTG 
GAGTTGCAGC TCAACTGCGA GCCGGCCTTC GATTACAACC GGGCGGGCGC GAAATGGGAG 
TACTCCTCGG ACGGCTACGG CGAGGCGATC GCCCGCGCGC GATCGGAGAC GGACCTGCAT 
CCCGAGCTGA AGCTCACCAC CAACATGCGG CTCGGCCTGG AGGGCAGGGA GGCCCGCGCG 
CACACCAGGA TGCAGGAGGG CGACGAGGCA TTCGTCGCAC TGTCGTGGAG CAAGCATCCG 
GTGCCGCAGA CCTTCGCGGA GGCTGCGAAG AAGATGTGGT CGACGGCGGA GTCGTGGCGG 
CAGTGGATCA ACCGGGGCCA GTTCCCCGAC CACCCGTGGC GCTCGTATCT GCAGCGTTCG 
GCGCTCACAC TCAAGGGGCT CACCTACTCG CCGACGGGTG CCTTGCTCGC GGCGTCGACC 
ACGTCGCTGC CCGAGACCCC GCACGGGGAG CGGAACTGGG ACTACCGCTA CGCCTGGGTG 
CGCGACTCGA CGTTCGCACT GTGGGGCCTG TACACACTGG GCTTGGACCG GGAGGCCGAG 
GACTTCTTCG CGTTCATCGC CGACGTCTCG GGGGCGAACA ACGGTGAGCG ACATCCGTTG 
CAGGTGATGT ACGGCGTGGG CGGCGAACGC ACGCTGATCG AGGAGGAGCT CCCGCACCTG 
TCGGGGTACG ACGGTGCGCA GCCCGTCCGG ATCGGCAACG GCGCGTACAA CCAACGCCAG 
CACGACATCT GGGGCACGAT GCTGGACTCG GTGTACCTGA ACACCAAGTC CAGTGAGCGC 
ATCCCGGAGA CCCTGTGGCC AGTGCTCAAG GAGCAGGTCG AGGAGACGCT CAAGCATTGG 
CGTGAGCCCG ACCGTGGCAT CTGGGAGGTG CGGGGCGAAC CGCAGCACTT CACCTCGTCG 
AAGGTGATGT GCTGGGTGGC GCTCGATCGC GGCGCCAAGC TGGCGGCGAT GCACGGTGAG 
GACGATTACG CCCGCAAGTG GGCCGAGCAG GCCGACGTCA TCAAGGAAGA CATCCTCGAA 
CACGGCGTGG ACGAGCGCGG GGTGTTCACC CAGCGGTACG GCAACGACGC GCTCGATGCC 
TCGCTGCTAC TGGTGCCGCT GCTGCGCTTC CTGCCCTCCG ACGATCCGCG GGTGCGGGCG 
ACGGTGATCG CCATCGCCGA CGAGCTCACC GAGGACGGCC TGGTGCTGCG GTACCGCGTG 
GAGGAGACCG ACGACGGACT CTCCGGCGAG GAGGGAACCT TCACGATCTG CTCGTTCTGG 
CTGGTGTCGG CGTTGGTGGA GATCGGCGAG GTGGCCCGCG GCCGGGCGCT GTGCGAGCGG 
CTGCTGGCCT ACTCGTCACC GCTGAAGCTG TACGCCGAGG AGATCGACCC GAAGTCCGGC 
AAACACCTGG GCAACTTCCC GCAGGCGTTC ACGCATCTGG CACTGATCAA CGCCGTGGTG 
CACGTGATCC GCGCCGAGGA CACCGCGCAC GACGCGTCGG CGTTCCTCCC GGCGCATCAC 
ACGCCGTAG 

 

Protein sequence

MAPKQNAVAD SADAVVTAAA AEVAAVVVGD NAFPPIHDYA FLSDCENTCL IARDGSVEWM 
CIPRPDSPSV FGAILDRGAG SFRLAPYGVR VPVDRRYLPG SLMLETTWQT STGWLIVRDA 
LVMGPWHDTQ TRSRTHRRTP TDWDAEHILL RTVRCVSGTV ELQLNCEPAF DYNRAGAKWE 
YSSDGYGEAI ARARSETDLH PELKLTTNMR LGLEGREARA HTRMQEGDEA FVALSWSKHP 
VPQTFAEAAK KMWSTAESWR QWINRGQFPD HPWRSYLQRS ALTLKGLTYS PTGALLAAST 
TSLPETPHGE RNWDYRYAWV RDSTFALWGL YTLGLDREAE DFFAFIADVS GANNGERHPL 
QVMYGVGGER TLIEEELPHL SGYDGAQPVR IGNGAYNQRQ HDIWGTMLDS VYLNTKSSER 
IPETLWPVLK EQVEETLKHW REPDRGIWEV RGEPQHFTSS KVMCWVALDR GAKLAAMHGE 
DDYARKWAEQ ADVIKEDILE HGVDERGVFT QRYGNDALDA SLLLVPLLRF LPSDDPRVRA 
TVIAIADELT EDGLVLRYRV EETDDGLSGE EGTFTICSFW LVSALVEIGE VARGRALCER 
LLAYSSPLKL YAEEIDPKSG KHLGNFPQAF THLALINAVV HVIRAEDTAH DASAFLPAHH 
TP