| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2651 |
|---|
| Symbol | |
|---|
| ID | 9156812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2754995 |
|---|
| End bp | 2756563 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| Protein accession | YP_003647590 |
|---|
| Protein GI | 296140347 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGAAA CGACTCTCAC GCGACCCGCC CACCCCCGCG GAGCCACGCT GACGGAGATC
GCCGCGCAGG TACCGGGCGT CATCAGCGTC CCGGCGAGCA GCGACTCCGG CGAGGTCCGC
TGCAGCGGGG CGACCATCCG CGCGCAGGAC GCGCGGCCCG GTGACCTCTT CTGCGGCGTC
CCCGGCACCT CCACGCATGG GGCTCGGTTC GCTGCGGAGG CGGTGGCCGC CGGTGCGGTC
GCCGTACTCA CCGACTCGGC CGGCGCGGCC GTGCTGGCCG AGGCCGGGGT CGACGTCCCG
GTGCTCCTGC ACGACGATCC ACGGTCCGTC CTCGGCCCCG CGGCGGCCGT GATCTACGGC
GCACCGTCGA CGAAGATGAC GCTCGTCGGG ATCACCGGAA CCTCCGGCAA GACCACCACC
AGCTTCCTGG TCGAGGCCGC CCTCGGCGCC ACGCAGGCGA CCACCGGGCT GATCGGTACC
GTCGGCACCC GGATCGCGGG CGTCGACGTG CCCACCTCGC TCACCACGCC CGAGGGCACC
GCCCTACAGG GACTGTTCGC GTCGATGGTC GAGCAGGGCG TCACCTCCGC CGTGATGGAG
GTGAGCTCGC ACGCGCTGGC GCAGAACCGG GTGGGCGGCA CCCGCTTCGC GGTCGGCGCC
TTCACCAACC TCAGCCAGGA CCATCTCGAT TACCACCCCA CGATGGAGGA TTACTTCGCG
GCCAAGGCCC TCCTCTTCGT CCCCGACGAG TCCGGCGACG GTCCCGTCTG CGAGCAGGCC
GTGATCTGCG TCGACGACGA GTGGGGCAAC CGGATGGCCG ACCTGCGCCG TGATGCCGGG
CTGCCGCTGG TCACCGTTGC CACCACCGGT CCCGCCGATT GGACCGCCGG CGCGGTCTCG
GCGCACGCCG ATGGAACCCA GCGGTTCACT CTCACCGGGC CGGGCGGTCA GAGCTTCTCG
GCCACCGTCG GCCTCCCGGG CGCCTACAAC GTGGCCAATG CGGCCCTCGC CCTGGTGGTC
GCCCACGAGG CCGGGGTGCC CCTCGCCGAT GCCGTCCGGG GGATCGGCGC GGTCGCTGTG
CCGGGGCGGG TGCAACGGAT CGACCGCGGT CAGGACTTCC TCGCCGTCGT CGACTACGCG
CACAAGCCGG CCGCGCTCGA CGCCGTGATC GCCACGCTCC GCGGTCAGAC CGCAGGCCGG
ATCGCCGTGG TGGTCGGCGC CGGCGGCGAC CGCGACCGCG GGAAGCGCCC GCTCATGGGC
GAGGTCGCCG CGCGCGCCGC CGAGCTGGTG ATCGTCACCG ATGACAACCC CCGCACCGAA
GACCCCGCCG CGATCCGCGC GGCCGTGCGC GCGGGCGCCG AGGCGGTGCC CGGCGGGGGC
GAGGTGCGCG AGATCGGCGA CCGTCGTGCC GCGATCACCG AGGCGGTGGA CTGGGCCCGC
ACGGGTGATG TGGTGCTCAT CGCGGGCAAG GGCCACGAGG CGGGCCAGGA GATCAACGGC
GTCAAGCACC CCTTCGACGA CCGCGACGAG CTCGCCGCGG CACTGGACAC GCGGGGGGAG
CGCGCATGA
|
|---|
| Protein sequence | MPETTLTRPA HPRGATLTEI AAQVPGVISV PASSDSGEVR CSGATIRAQD ARPGDLFCGV
PGTSTHGARF AAEAVAAGAV AVLTDSAGAA VLAEAGVDVP VLLHDDPRSV LGPAAAVIYG
APSTKMTLVG ITGTSGKTTT SFLVEAALGA TQATTGLIGT VGTRIAGVDV PTSLTTPEGT
ALQGLFASMV EQGVTSAVME VSSHALAQNR VGGTRFAVGA FTNLSQDHLD YHPTMEDYFA
AKALLFVPDE SGDGPVCEQA VICVDDEWGN RMADLRRDAG LPLVTVATTG PADWTAGAVS
AHADGTQRFT LTGPGGQSFS ATVGLPGAYN VANAALALVV AHEAGVPLAD AVRGIGAVAV
PGRVQRIDRG QDFLAVVDYA HKPAALDAVI ATLRGQTAGR IAVVVGAGGD RDRGKRPLMG
EVAARAAELV IVTDDNPRTE DPAAIRAAVR AGAEAVPGGG EVREIGDRRA AITEAVDWAR
TGDVVLIAGK GHEAGQEING VKHPFDDRDE LAAALDTRGE RA
|
|---|
| |