| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2648 |
|---|
| Symbol | |
|---|
| ID | 9156809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 2750929 |
|---|
| End bp | 2752389 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
|---|
| Protein accession | YP_003647587 |
|---|
| Protein GI | 296140344 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC TCCCCGGCCC CGGCGCGCAC GTCCTCGTCG CGGGCGGGGG TGTCACCGGC
CCGGCCGTCG CCCGGGCGCT GCTCCGGCTC GGTGCCGCCG TCACGGTCGC CGACGGTAAG
CCCGTGGCGC GCGAGAAGAT CGCCGCCGAG GTACCCGAGG TCGCGGTCGT CGACCTCGAC
GATCTCGATC CGGCCGGATA CGCACTCGTG GTCGTGGCCC CCGGCTTCCG TCCCACCGCG
CCGATCGTCG TCGCCGCACA GGACGCGGGC GTTCCGGTGA TCGGCGATGT CGAACTGGCC
TGGTGGATCG ACCGGGCGGG CGCCTTCGGG GCGCCGCGGG ACTGGCTCGT GGTCACCGGG
ACCAACGGTA AGACCACGAC CACTCAGATG CTCGAGTCGA TCCTGGCGCA CGCGGGTCTG
CCCGCGGTCG CATGCGGCAA CATCGGCCGC CCGGTGATCG ACGCGATCGC CGACGCCGCC
GATCCCCGCG TGCTCGCCGT CGAACTCTCG TCCTTCCAAC TGCACTGGGC GCCGTCGGTG
CGCCCGCGCG CCGGCGTCGT CCTCAACATC GCCGAGGACC ATCTTGACTG GCACGGCTCC
ATGGCCGCGT ATACGGCCGA TAAGGCGCGT GCCCTGACCG GTGATATCGC GGTCGTCGGG
CTCGACGATC CGGTCGCCGC AACGCTGCCC GCGGCCACCG GGTTCACCGT CGGGGAGCCC
GCGCCCGGGC AGTACGGGGT CCGCGCCGGA ATGCTGATCG ACGGTGCCGG ATCGTCCATC
GTGCCGGCAG CCCGGGTCTC GCCGCCCGGG CCCGCGGGCA TCGCCGATGC GCTGGCCGCG
ACGGCGCTGG CGCAGGCGGT CGGTGTGACC GCTGCGCAGG CAGGGGCGGC CCTGACGCAG
TTCCGGGTGG GGGCGCATCG CGCGGAGCCG GTCGCGACGG TCCGCGGCGT CACCTACATC
GACGATTCCA AAGCCACCAA TCCGCACGCG GCGCAGAACT CCATCGAGGC GCACGAGCGG
GTGGTGTGGG TGGCCGGCGG GCAGCTCAAG GGTGCCGATA TCGATCCGCT CGTCGCCCGG
GTGGCGTCGC GACTGGCCGG GGCGGTGCTG CTCGGCGTCG ACGCGGAGCT GATCGCGGCG
GCAATGGCGC GACACGCGCC GGATGTACCG GTGGTTCGGG TGACTTCAGG CGACGATAGT
CGTGTGTCTC CTGTGACTAA TGATGCAAGC CGTTCCATAG GGACTTCTGT GGCTGGCGAT
GTGCGAGTGT CCGGCGATGC GGATGCGGTC ATGACCGCCG CCGTCCATGC TGCCGCCGGT
CTCGCTGATG TCGCAGGTCA GAGCCGAACT CCAGTGGTGC TGCTCGCACC CGCCGCTGCC
TCGCTCGACA TGTTCCGCTC CTACGGGCAC CGTGGCGAGG CTTTCGCCAC CGCGGCGCGC
GCGCTCGGAG CGGCTTCGTG A
|
|---|
| Protein sequence | MTTLPGPGAH VLVAGGGVTG PAVARALLRL GAAVTVADGK PVAREKIAAE VPEVAVVDLD
DLDPAGYALV VVAPGFRPTA PIVVAAQDAG VPVIGDVELA WWIDRAGAFG APRDWLVVTG
TNGKTTTTQM LESILAHAGL PAVACGNIGR PVIDAIADAA DPRVLAVELS SFQLHWAPSV
RPRAGVVLNI AEDHLDWHGS MAAYTADKAR ALTGDIAVVG LDDPVAATLP AATGFTVGEP
APGQYGVRAG MLIDGAGSSI VPAARVSPPG PAGIADALAA TALAQAVGVT AAQAGAALTQ
FRVGAHRAEP VATVRGVTYI DDSKATNPHA AQNSIEAHER VVWVAGGQLK GADIDPLVAR
VASRLAGAVL LGVDAELIAA AMARHAPDVP VVRVTSGDDS RVSPVTNDAS RSIGTSVAGD
VRVSGDADAV MTAAVHAAAG LADVAGQSRT PVVLLAPAAA SLDMFRSYGH RGEAFATAAR
ALGAAS
|
|---|
| |