Gene Tpau_2620 details

Gene Information

• Locus tag: Tpau_2620
• ID: 9156781
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 2717206
• End bp: 2720757
• Gene Length: 3552 bp
• Protein Length: 1183 aa
• Translation table: 11
• GC content: 64%
• Product: DNA polymerase III, alpha subunit
• Protein accession: YP_003647562
• Protein GI: 296140319

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCCGCGC AAGATTCATT CGTGCATCTG CACAATCACA CCGAGTACTC GATGCTCGAC 
GGGGCTGCCA AGGTCGACCC GTTGTTCGCC GAGGCCAAGC GGCTGGGTAT GACGGCGGTC 
GGCATGTCCG ACCATGGCAA CATGTTCGGG GCGTCGGACT TCTACAACAC CGCGGTCAAG 
TACGACATCA AGCCGATCAT CGGCATCGAG GCGTACATCG CGCCGGAGTC CCGGTTCAAC 
ACCAAGCGCG TCCGCTGGGG CGATCCGTCG CAGAAGAGCG ACGACGTCTC GGGTTCGGGC 
GCCTACACGC ACATGACGAT GGTGGCCGAG AACGCCACCG GTCTGCGGAA CCTTTTCAAG 
CTCAGTTCCC TCGCTTCGAT CGAGGGGCAA CTCGGCAAGT GGTCTCGCAT GGACGCCGAG 
ATCATCGCCG AACACGCCGA GGGCATCATC GCGACCACCG GCTGCCCGTC GGGCGAGGTG 
CAGACCCGGC TGCGATTGGG GCACGAGCAG GAGGCGCTGG AGGCCGCGGC CAAATGGCAG 
GAGATCTTCG GCAAGGAGAA CTTCTACCTG GAACTGATGG ATCACGGCAT CGACATCGAG 
CGGCGCGTGC GCGAGGGGCT GCTGGAGATC GGCCGCAAGC TCGGGATCAA GCCGCTCGCC 
ACGAACGACT GCCACTACGT CACCAAGGAC AAAGCCGAGT CGCACGGCGC GCTGTTGTGC 
ATCCAGACCG GTAAGACCCT GTCCGATCCC ACCCGCTTCC AGTTCGACGG TGACGGCTAC 
TACCTCAAGT CGGCGCAGGA GATGCGCGAG CTGTGGGATG CGCAGGTGCC CGGCGCGTGC 
GATTCGACTG TCGAGATCGG TGAGCGGGTC CAGTCCTATA AGGAGGTCTG GGAGCACAAG 
GACCGCATGC CGCGGTTCCC GGTGCCCGAG AACCACACTC AGGAGTCCTT CCTCGAATCC 
GAGGTCATGG ACGGCCTGAA CCGTCGTTTC CCGGACGGTC CGCCGCCGGA TTACGTCGAG 
CGCGCCAGGT ACGAGCTCTC GGTCATCAAC GAGATGGGCT TCCCCGCGTA CTTCCTCGTG 
GTCGGCGATC TGATCGCACA CGCACACGAG GTCGGTATCC GCGTGGGCCC GGGCCGTGGT 
TCAGCGGCGG GTTCGCTCGT GGCGTGGGCA TTGGGCATCA CCAACATCGA TCCGATCCCG 
CACGGCCTGC TGTTCGAGCG GTTCCTCAAC CCCGAGCGCG TCTCGATGCC CGATATCGAT 
ATCGACTTCG ATGATCGTCG TCGCGGCGAA ATGATCACCT ATGCCTCGGA GAAGTGGGGC 
TCGGACAAGG TGGCGCAGGT CATCACGTTC GGCACCATCA AGACCAAGGC CGCGATCAAG 
GACTCGGCCC GCGTCATCTA CGGGCAGCCC GGTTACTCGA TCGCCGACCG CATCACCAAG 
GCGCTGCCGC CGCCCATCAT GGCCAAGGAC ATCTCGGTCA AGGGCATCAC GGACCCGGCG 
CACGAGCGGT ACAAGGAAGC CGTCGAGGTC CGCCAGCTGA TCGAGACCGA CCCGGACGTC 
AAGAAGATCT ACGATATGGC GCTCGGGCTC GAGGGCCTGA TCCGCAACGC GGGCGTGCAC 
GCGTGCGCGG TGATCATGTC CTGCGATCCG CTCACCGACG CGATCCCCGT GTGGAAGCGC 
GCACAGGACG GCGCGATCAT CACCGGATGG GACTATCCGT CGTGTGAGGC CATCGGCCTC 
CTGAAGATGG ACTTCCTGGG CCTGCGCAAC CTCACCGTGA TCGGCGATGC GCTGGCCAAC 
ATCAAGCACA ACCGCGGCAT CGATCTCGAC ATGGACCAAC TCCCGCTGGA CGACGAGACC 
ACCTACCAGC TGCTGCAGCG GGGCAACACG CTCGGCGTCT TCCAGCTCGA CGGTGGACCG 
ATGCGAGATC TGCTGCGGCG CATGCAGCCC ACCAAGTTCG AGGACATCGT GGCCGTCGGT 
GCGCTCTACC GGCCGGGCCC GATGGGTGTG AACGCCCACA ACGACTACGC CGATCGCAAG 
AACGGCAGGC AACAGGTCAA GCCGATCCAC CCGGAGCTCG AGGAGCCGCT GGCCGAGATC 
CTATCGGAGA CTTTCGGTCT GATCGTGTAT CAGGAGCAGA TCATGCAGAT CGCGCAGAAG 
GTCGCGGGCT ACTCGCTCGG TCAGGCCGAC CTGCTGCGGC GTGCGATGGG TAAGAAGAAG 
AAGGAGATCC TCGACGAGGC CTACGGTGGC TTCCAGCAGG GCATGCTCGA CAACGGGTTC 
TCCCAACCCG CGATCACCGC GCTGTGGGAG ACGGTGCTGC CGTTCGCCGG CTACGCGTTC 
AACAAGTCGC ACGCCGCAGC GTACGGCCTG GTCTCGTATT GGACCGCGTA CCTCAAGGCG 
AACTACCCGG CCGAGTACAT GGCCGCGCTG CTCACCTCCG TCGGCGACGA CAAGGACAAG 
GCCGCGATCT ACCTCGGCGA CTGCCGCCGC CTCGGCATCA CCGTCCTCCC GCCGGACGTC 
AACGAGTCCT TCCACGCCTT CACTTCCGTC GGCGAGGACA TCCGCTTCGG CATGGGCTCG 
GTGCGCAACG TCGGCGAGGG GGTTGTCGCG TCCATCGTGA ACACGCGTGA GGAGAAGGGG 
AACTTCACGT CCTTCTCCGA CTACCTCGCC AAGATCGAGG TTGCGGCCTG CTCCAAGAAG 
GTGACCGAAT CCCTCATCAA GGCGGGCGGT TTCGACTCGC TGGAGCATCC CCGCAAGGGG 
CTGTTCCTGG TGCACAGCGA CGCGATCGAG TCGGTGTTGT CCACCAAGAA GGCCGAGGCC 
GTGGGCCAGT TCGACCTCTT CGGCTCCATG GGCGACGAGG GCGGCGGTAC CGAACCGATC 
GACGACGTGT TCACGATCAA GGTGCCGGAC GAGGAGTGGG ACGGCAAGCA CAAGCTCGCG 
CTGGAACGCG AGATGCTCGG CCTGTACGTC TCCGCCCACC CGCTCGACGG TGTCGAGCAC 
GTGATCGCGG CGCAGACCGA CACCCCGATC CCGGCCATCG TCGAAGGCGA TGTCAAGGAC 
GGCACTCAGG TGACCGTCGG CGGCATCCTG CAGTCGGTGA ACCGGCGCGT GAACAAGAAC 
GGCGCGCCGT TCGCATCGGC GCAGATCGAG GATCTCTCCG GTGGCATCGA GGTCTTCTTC 
TTTCCGCAGG CCTACGCCGC GTATGGGGCG GAGGTGGTCG AAGACGCCGT GGTGCTGATC 
AAGGCGCGGG TCAACTTCCG GGACGACAAG GTCACGCTGA TCGCGAACGA CATCGCCCCC 
ATCGATCTGT CGCAGATCGG CGTTGCGAAG CCGTTGTCGC TGACCATGCC GACGCGAATC 
TGCACGCACG ACAAGGTGTC CGCGCTCAAG CAGGTGCTCC AGCGGCACCC CGGCGTCTCG 
GATGTGCACG TCAAACTCGT TAGCGGGGAT AAGGCCACGA CGCTGCGGCT GGACGACACA 
CTCCGAGTGA ATCAGTCGTC ATCGTTGATG GGTGATCTGA AGGCCCTGCT CGGCCCGAAC 
TGCCTGTCCT GA 

 

Protein sequence

MPAQDSFVHL HNHTEYSMLD GAAKVDPLFA EAKRLGMTAV GMSDHGNMFG ASDFYNTAVK 
YDIKPIIGIE AYIAPESRFN TKRVRWGDPS QKSDDVSGSG AYTHMTMVAE NATGLRNLFK 
LSSLASIEGQ LGKWSRMDAE IIAEHAEGII ATTGCPSGEV QTRLRLGHEQ EALEAAAKWQ 
EIFGKENFYL ELMDHGIDIE RRVREGLLEI GRKLGIKPLA TNDCHYVTKD KAESHGALLC 
IQTGKTLSDP TRFQFDGDGY YLKSAQEMRE LWDAQVPGAC DSTVEIGERV QSYKEVWEHK 
DRMPRFPVPE NHTQESFLES EVMDGLNRRF PDGPPPDYVE RARYELSVIN EMGFPAYFLV 
VGDLIAHAHE VGIRVGPGRG SAAGSLVAWA LGITNIDPIP HGLLFERFLN PERVSMPDID 
IDFDDRRRGE MITYASEKWG SDKVAQVITF GTIKTKAAIK DSARVIYGQP GYSIADRITK 
ALPPPIMAKD ISVKGITDPA HERYKEAVEV RQLIETDPDV KKIYDMALGL EGLIRNAGVH 
ACAVIMSCDP LTDAIPVWKR AQDGAIITGW DYPSCEAIGL LKMDFLGLRN LTVIGDALAN 
IKHNRGIDLD MDQLPLDDET TYQLLQRGNT LGVFQLDGGP MRDLLRRMQP TKFEDIVAVG 
ALYRPGPMGV NAHNDYADRK NGRQQVKPIH PELEEPLAEI LSETFGLIVY QEQIMQIAQK 
VAGYSLGQAD LLRRAMGKKK KEILDEAYGG FQQGMLDNGF SQPAITALWE TVLPFAGYAF 
NKSHAAAYGL VSYWTAYLKA NYPAEYMAAL LTSVGDDKDK AAIYLGDCRR LGITVLPPDV 
NESFHAFTSV GEDIRFGMGS VRNVGEGVVA SIVNTREEKG NFTSFSDYLA KIEVAACSKK 
VTESLIKAGG FDSLEHPRKG LFLVHSDAIE SVLSTKKAEA VGQFDLFGSM GDEGGGTEPI 
DDVFTIKVPD EEWDGKHKLA LEREMLGLYV SAHPLDGVEH VIAAQTDTPI PAIVEGDVKD 
GTQVTVGGIL QSVNRRVNKN GAPFASAQIE DLSGGIEVFF FPQAYAAYGA EVVEDAVVLI 
KARVNFRDDK VTLIANDIAP IDLSQIGVAK PLSLTMPTRI CTHDKVSALK QVLQRHPGVS 
DVHVKLVSGD KATTLRLDDT LRVNQSSSLM GDLKALLGPN CLS