Gene Tpau_2599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_2599 
Symbol 
ID9156760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp2698239 
End bp2698922 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003647541 
Protein GI296140298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000683543 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGTGG TCACCGCGTC CAGCGGCTGC GGAACTGAAT ACCTCGACCT GCCGGCCTCG 
AGTATCTCGC TGCGCGCTAC GGCGCCCGCG TGGTCGGGCA CGCGGGTGGC CGTCGTGGGT 
GACAGCTTCA CCGCCGGAAC ACAGTACGGC GGAAGGGGTG AGGCGAACTG GGTGGCCCGT 
ACCCGGGCGG CAGTGCAGGT GGCGAGCCTG TCGATCGATG TGGCGGTGTC CGCGTACGGC 
GGTCAGGGAT ACCTGGCCAA GGGGGAGGGC GGGCACACGT TCGGCGACAG CGCTCGCGCC 
GTCGTCGATT CGGAGACCGC CGGCGTGGTG GTGTTCGGCG GTTCGAACGA CATCAACGTC 
AAGGGCGATC TGCCCCGTGC CGTGCAGGCG CTATGCGATG AGGTGCGGAA GACGGCACGG 
GGAATCAAGA TCCTGATCGT GACCCCGGCC TGGCCCAGTT CGGCGGCCGG GGTGGTCGCC 
GTCGCCGACA ATGCCGCTGT ACTCAAGAAC GCCGCACGCC CCTGTTTGGC GGAAGTCATG 
GATCCGGTGG CCGACAAGTG GTTTCCTGAT CTGGACAGTC GGCGCGCAGA GTTCATAGGA 
TCCGATGGCA TCCACCCCAC TGACGCGGCG CACGCCGTCT TCGCGGACCG AATCGCTCCG 
TGGATCATGC AGTTCAAAAG ATAG
 
Protein sequence
MIVVTASSGC GTEYLDLPAS SISLRATAPA WSGTRVAVVG DSFTAGTQYG GRGEANWVAR 
TRAAVQVASL SIDVAVSAYG GQGYLAKGEG GHTFGDSARA VVDSETAGVV VFGGSNDINV 
KGDLPRAVQA LCDEVRKTAR GIKILIVTPA WPSSAAGVVA VADNAAVLKN AARPCLAEVM 
DPVADKWFPD LDSRRAEFIG SDGIHPTDAA HAVFADRIAP WIMQFKR